CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024109_P001	Maize	cytosol	83.4	90.35
GSMUA_Achr6P04960_001	Banana	cytosol	61.13	68.02
CDX73515	Canola	cytosol	46.15	65.9
PGSC0003DMT400022940	Potato	cytosol	34.01	64.62
VIT_08s0007g01100.t01	Wine grape	cytosol	58.7	63.88
CDY70621	Canola	plastid	33.6	63.85
Bra003159.1-P	Field mustard	plastid	56.68	62.22
EES19635	Sorghum	plastid	58.3	49.66
KRH75660	Soybean	plastid	57.49	49.65
CDY54029	Canola	plastid	57.89	49.48
CDY59158	Canola	plastid	57.49	49.31
Bra007034.1-P	Field mustard	plastid	57.89	49.14
CDX67576	Canola	plastid	57.09	48.79
AT3G53900.2	Thale cress	plastid	56.68	47.3
KRH65897	Soybean	plastid	57.89	39.29
Solyc03g063860.1.1	Tomato	cytosol	21.86	37.5
EER99151	Sorghum	cytosol	28.74	14.49
EES15317	Sorghum	plastid	26.72	13.87
KXG24145	Sorghum	cytosol	22.27	11.65
KXG29238	Sorghum	mitochondrion	23.08	9.55
KXG30947	Sorghum	plastid	11.34	6.71
EES12777	Sorghum	plastid	8.91	5.68

Protein Annotations

KEGG:00240+2.4.2.9	Gene3D:3.40.50.2020	MapMan:6.2.2.2	UniProt:A0A1B6PJ35	GO:GO:0003674	GO:GO:0003824
GO:GO:0004845	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0006139	GO:GO:0006223	GO:GO:0006950	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009116	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009605
GO:GO:0009987	GO:GO:0009991	GO:GO:0016036	GO:GO:0016740	GO:GO:0032502	EnsemblPlants:KXG25691
ProteinID:KXG25691	ProteinID:KXG25691.1	PFAM:PF14681	InterPro:PRTase-like	InterPro:PRibTrfase_dom	PANTHER:PTHR10285
PANTHER:PTHR10285:SF46	MetaCyc:PWY-7183	EnsemblPlantsGene:SORBI_3007G218600	SUPFAM:SSF53271	TIGRFAMs:TIGR01091	UniParc:UPI00022071E7
InterPro:Ura_phspho_trans	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:64682415..64685919

Molecular Weight (calculated)

26814.7 Da

IEP (calculated)

7.462

GRAVY (calculated)

0.100

Length

247 amino acids

Sequence
(BLAST)

001: MENCNNGPAA ADNFKVRTHP LTRCIDQGVG GLLCRWQVVV PEHPLISHWV SVLRDRFTPS HAFRSAMGEL GRLLIYEATR DWLPTVTREI QTPVGTAVVE
101: SVSEMEPIMI VPILRAGLAL ADLATSILPS TKTFHLGMSR DETTLLPSVY LNKLPDRFPK GCNILLVDPM LATGGTVTAA VDLVKERGAE ISQIRIISAV
201: AAPPAIKKLN QRFPGICVYT GTMDQIVNEK GFIVPGLGDA GDRSYGT

Best Arabidopsis Sequence Match ( AT3G53900.2 )
(BLAST)

001: MACSIGNAFR CSSDTLRFAP RQQCSSRLNP NPSSFLSFNS SPILAQNLGA SSSSLSRRTI RARTKMAASE ASINGSNRML VFVPPHPLIK HWISVLRNEQ
101: TPCPVFRNAI AELGRLLMYE ASREWLPTVV GEIMSPMGPA SVEFIDPREP IAVVPILRAG LALAEHASSV LPANKIYHLG VSRDEKTLLP SVYLNKLPDE
201: FPKNSRVFLV DPVLATGGTI MAAMDLLKER GLSVQQIKVI CAIAAPPALS KLNEKFPGLH VYAGIIDPEV NEKGYIIPGL GDAGDRSFGT ETHWVK

Arabidopsis Description

UPPUracil phosphoribosyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M336]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.