Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g011300.2.1 | Tomato | plastid | 51.39 | 25.87 |
| GSMUA_Achr6P04960_001 | Banana | cytosol | 39.58 | 25.68 |
| Zm00001d024109_P001 | Maize | cytosol | 36.11 | 22.81 |
| TraesCS1A01G281700.1 | Wheat | plastid | 45.83 | 22.37 |
| TraesCS1B01G290800.1 | Wheat | plastid | 45.83 | 22.37 |
| TraesCS1D01G280900.1 | Wheat | plastid | 45.83 | 22.37 |
| KXG25691 | Sorghum | cytosol | 37.5 | 21.86 |
| HORVU1Hr1G072750.2 | Barley | plasma membrane | 46.53 | 21.07 |
| Os05t0455700-02 | Rice | plastid | 43.75 | 20.93 |
| Solyc06g065580.2.1 | Tomato | cytosol | 22.92 | 6.83 |
| Solyc10g005880.2.1 | Tomato | cytosol | 17.36 | 5.92 |
| Solyc02g067880.1.1 | Tomato | cytosol | 18.06 | 5.84 |
| Solyc07g065890.2.1 | Tomato | cytosol, plastid | 18.06 | 5.83 |
| Solyc08g076220.2.1 | Tomato | plastid | 9.03 | 3.25 |
Protein Annotations
| EnsemblPlants:Solyc03g063860.1.1 | EnsemblPlantsGene:Solyc03g063860.1 | Gene3D:3.40.50.2020 | InterPro:PRTase-like | PANTHER:PTHR10285 | PANTHER:PTHR10285:SF46 |
| SUPFAM:SSF53271 | UniParc:UPI0002767827 | UniProt:K4BHC4 | MapMan:6.2.2.2 | : | : |
Description
No Description!
Coordinates
chr3:-:36235335..36235810
Molecular Weight (calculated)
16062.6 Da
IEP (calculated)
7.608
GRAVY (calculated)
0.192
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEFLMDESI LVHNPTGKNN IVNGSFNRIG EQSVFDDTML VFVLPYPLIK HYILVLRNEQ MPCPIIKNAT SDLGRFFKRD PITKSIVSVE FVSLRKPVSI
101: VPISRAALDL ANDVSSILAA AKTFHLGVSR NEETLQSSVY LNVA
101: VPISRAALDL ANDVSSILAA AKTFHLGVSR NEETLQSSVY LNVA
001: MAASEASING SNRMLVFVPP HPLIKHWISV LRNEQTPCPV FRNAIAELGR LLMYEASREW LPTVVGEIMS PMGPASVEFI DPREPIAVVP ILRAGLALAE
101: HASSVLPANK IYHLGVSRDE KTLLPSVYLN KLPDEFPKNS RVFLVDPVLA TGGTIMAAMD LLKERGLSVQ QIKVICAIAA PPALSKLNEK FPGLHVYAGI
201: IDPEVNEKGY IIPGLGDAGD RSFGTETHWV K
101: HASSVLPANK IYHLGVSRDE KTLLPSVYLN KLPDEFPKNS RVFLVDPVLA TGGTIMAAMD LLKERGLSVQ QIKVICAIAA PPALSKLNEK FPGLHVYAGI
201: IDPEVNEKGY IIPGLGDAGD RSFGTETHWV K
Arabidopsis Description
UPPUracil phosphoribosyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M336]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.