Factsheet for GSMUA_Achr6P04960_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, plastid	77.48	63.94
Zm00001d024109_P001	Maize	cytosol	64.86	63.16
KXG25691	Sorghum	cytosol	68.02	61.13
TraesCS1D01G280900.1	Wheat	plastid	70.27	52.88
TraesCS1A01G281700.1	Wheat	plastid	70.27	52.88
Os05t0455700-02	Rice	plastid	71.62	52.82
TraesCS1B01G290800.1	Wheat	plastid	69.82	52.54
HORVU1Hr1G072750.2	Barley	plasma membrane	70.72	49.37
Solyc03g063860.1.1	Tomato	cytosol	25.68	39.58
GSMUA_Achr5P25140_001	Banana	cytosol	30.18	13.93
GSMUA_AchrUn_...	Banana	cytosol	27.93	13.54
GSMUA_Achr2P09720_001	Banana	cytosol	5.86	12.87
GSMUA_Achr4P15950_001	Banana	cytosol	27.03	12.79
GSMUA_Achr8P34310_001	Banana	cytosol	25.68	12.18
GSMUA_Achr4P27410_001	Banana	plasma membrane, plastid	12.16	6.67
GSMUA_Achr1P23890_001	Banana	plastid	12.16	6.63
GSMUA_Achr5P03660_001	Banana	plastid	11.71	5.88
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane, plastid	0.0	0.0

Protein Annotations

KEGG:00240+2.4.2.9	Gene3D:3.40.50.2020	MapMan:6.2.2.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004845
GO:GO:0006139	GO:GO:0006223	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116
GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSMUA_Achr6G04960_001	EnsemblPlants:GSMUA_Achr6P04960_001	EnsemblPlants:GSMUA_Achr6T04960_001	UniProt:M0T494
PFAM:PF14681	InterPro:PRTase-like	InterPro:PRibTrfase_dom	PANTHER:PTHR10285	PANTHER:PTHR10285:SF46	SUPFAM:SSF53271
TIGRFAMs:TIGR01091	UniParc:UPI000295E854	InterPro:Ura_phspho_trans	:	:	:

Description

Uracil phosphoribosyltransferase [Source:GMGC_GENE;Acc:GSMUA_Achr6G04960_001]

Coordinates

chr6:-:3380998..3388452

Molecular Weight (calculated)

24197.6 Da

IEP (calculated)

5.945

GRAVY (calculated)

0.067

Length

222 amino acids

Sequence
(BLAST)

001: MEEEPVANGT TMVCVPSHPL IKHWISILRN EQTPCATFKN AMAELGRLLI YEASRDWLPV VNGEIRTPMG VATVEFVDPH EPIMIVPILR AGLALAEHAS
101: SVLPATRTYH LGMRRDEMTL EPSLYLNKLP DKFQEGSQIL LIDPMLATGG TVIAAVDLLK DRGAEDKQIK VISAIAAPPA LRKLSQKFPG LHVYTGIVDP
201: ILNEKGFIVP GLGDAGDRSF GT

Best Arabidopsis Sequence Match ( AT3G53900.2 )
(BLAST)

001: MACSIGNAFR CSSDTLRFAP RQQCSSRLNP NPSSFLSFNS SPILAQNLGA SSSSLSRRTI RARTKMAASE ASINGSNRML VFVPPHPLIK HWISVLRNEQ
101: TPCPVFRNAI AELGRLLMYE ASREWLPTVV GEIMSPMGPA SVEFIDPREP IAVVPILRAG LALAEHASSV LPANKIYHLG VSRDEKTLLP SVYLNKLPDE
201: FPKNSRVFLV DPVLATGGTI MAAMDLLKER GLSVQQIKVI CAIAAPPALS KLNEKFPGLH VYAGIIDPEV NEKGYIIPGL GDAGDRSFGT ETHWVK

Arabidopsis Description

UPPUracil phosphoribosyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M336]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.