Factsheet for GSMUA_Achr4P27410_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

plasma membrane: 21334471

msms PMID: 21334471 doi

A Vertommen, AL Møller, JH Cordewener, R Swennen, B Panis, C Finnie, AH America, SC Carpentier

Laboratory of Tropical Crop Improvement, Department of Biosystems, K.U. Leuven, Kasteelpark Arenberg 13, PO box 2455, B-3001 Heverlee, Belgium.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P23890_001	Banana	plastid	72.84	72.48
GSMUA_Achr2P09720_001	Banana	cytosol	18.02	72.28
GSMUA_Achr5P03660_001	Banana	plastid	71.85	65.84
GSMUA_Achr5P25140_001	Banana	cytosol	18.52	15.59
GSMUA_Achr8P34310_001	Banana	cytosol	17.78	15.38
GSMUA_Achr4P15950_001	Banana	cytosol	17.53	15.14
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane, plastid	3.7	15.0
GSMUA_AchrUn_...	Banana	cytosol	15.56	13.76
GSMUA_Achr6P04960_001	Banana	cytosol	6.67	12.16
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, plastid	6.67	10.04

Protein Annotations

KEGG:00710+2.7.1.19	MapMan:1.2.11	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008974
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	EnsemblPlantsGene:GSMUA_Achr4G27410_001	EnsemblPlants:GSMUA_Achr4P27410_001
EnsemblPlants:GSMUA_Achr4T27410_001	UniProt:M0SSK3	InterPro:P-loop_NTPase	PFAM:PF00485	PRINTS:PR00478	InterPro:PRK
InterPro:PRK/URK	ScanProsite:PS00567	PANTHER:PTHR10285	PANTHER:PTHR10285:SF120	SUPFAM:SSF52540	UniParc:UPI0002962C9E
SEG:seg	:	:	:	:	:

Description

Phosphoribulokinase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr4G27410_001]

Coordinates

chr4:+:26251607..26253484

Molecular Weight (calculated)

44893.6 Da

IEP (calculated)

6.356

GRAVY (calculated)

-0.239

Length

405 amino acids

Sequence
(BLAST)

001: MATCAVYTTP SLHSCSITSP AKTSLGFHQR QVIFFTSRRI TKRGGRSTSE VTCSAEAKTV VIGLAADSGC GKSTFMRRLT SVFGGAAEPP KGGNPDSNTL
101: ISDTTTVICL DDYHSLDRTG RKEKGVTALD PRANNFDLMY EQVKALKDGV AVDKPIYNHV TGLLDPPELI RPPKILVIEG LHPMFDPRVR ELLDFSIYLD
201: ISDEVKFAWK IQRDMAERGH SLESIKASIE ARKPDFDAYI DPQKQHADAV VEVLPTQLIP DDNEGKVLRV RLIMKEGLKH FSPVYLFDEG STISWIPCGR
301: KLTCSYPGIK FAYAPDTYYS NEVSVLEMDG QFDRLDELIY VESHLSNLST KFYGEVTQQM LKHSDFPGSN NGTGLFQTIV GLKIRDLFEQ IVAERAAAVA
401: EAAKV

Best Arabidopsis Sequence Match ( AT1G32060.1 )
(BLAST)

001: MAVSTIYSTQ ALNSTHFLTS SSSSKQVFLY RRQPQTNRRF NTLITCAQET IVIGLAADSG CGKSTFMRRL TSVFGGAAKP PKGGNPDSNT LISDTTTVIC
101: LDDYHSLDRY GRKEQKVTAL DPRANDFDLM YEQVKALKNG IAVEKPIYNH VTGLLDPPEL IQPPKILVIE GLHPMFDERV RDLLDFSIYL DISNEVKFAW
201: KIQRDMAERG HSLESIKASI EARKPDFDAF IDPQKQYADA VIEVLPTTLI PDDNEGKVLR VRLIMKEGVK YFSPVYLFDE GSTISWIPCG RKLTCSYPGI
301: KFNYEPDSYF DHEVSVLEMD GQFDRLDELI YVESHLSNLS TKFYGEVTQQ MLKHADFPGS NNGTGLFQTI VGLKIRDLYE QLIANKATAR AEAKA

Arabidopsis Description

PRKPhosphoribulokinase [Source:UniProtKB/TrEMBL;Acc:A0A178WLP9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.