Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
29385242
|
msms PMID:
29385242
doi
Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G280900.1 | Wheat | plastid | 87.42 | 94.24 |
| TraesCS1A01G281700.1 | Wheat | plastid | 87.42 | 94.24 |
| TraesCS1B01G290800.1 | Wheat | plastid | 86.48 | 93.22 |
| Os05t0455700-02 | Rice | plastid | 78.62 | 83.06 |
| EES19635 | Sorghum | plastid | 72.96 | 80.0 |
| PGSC0003DMT400022940 | Potato | cytosol | 32.39 | 79.23 |
| Zm00001d038362_P002 | Maize | plastid | 70.75 | 77.59 |
| VIT_08s0007g01100.t01 | Wine grape | cytosol | 53.14 | 74.45 |
| CDY70621 | Canola | plastid | 29.56 | 72.31 |
| GSMUA_Achr6P04960_001 | Banana | cytosol | 49.37 | 70.72 |
| CDX73515 | Canola | cytosol | 38.05 | 69.94 |
| Bra003159.1-P | Field mustard | plastid | 47.8 | 67.56 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane, plastid | 56.29 | 66.54 |
| KRH75660 | Soybean | plastid | 56.29 | 62.59 |
| Solyc09g011300.2.1 | Tomato | plastid | 55.66 | 61.89 |
| CDY54029 | Canola | plastid | 52.83 | 58.13 |
| Bra007034.1-P | Field mustard | plastid | 52.83 | 57.73 |
| AT3G53900.2 | Thale cress | plastid | 52.83 | 56.76 |
| CDY59158 | Canola | plastid | 50.63 | 55.9 |
| CDX67576 | Canola | plastid | 50.63 | 55.71 |
| KRH65897 | Soybean | plastid | 56.6 | 49.45 |
| Solyc03g063860.1.1 | Tomato | cytosol | 21.07 | 46.53 |
| CDX94369 | Canola | cytosol, plastid, vacuole | 11.95 | 30.65 |
| CDY07735 | Canola | plastid | 19.18 | 22.34 |
| Bra012086.1-P | Field mustard | mitochondrion | 14.78 | 22.17 |
| Bra023238.1-P | Field mustard | mitochondrion | 22.33 | 21.07 |
| CDY72083 | Canola | cytosol | 3.14 | 15.62 |
| HORVU7Hr1G053940.14 | Barley | cytosol | 20.75 | 13.87 |
| HORVU5Hr1G076150.7 | Barley | cytosol | 21.7 | 12.9 |
| HORVU4Hr1G043970.12 | Barley | cytosol | 15.72 | 10.1 |
| HORVU4Hr1G025660.3 | Barley | cytosol | 5.66 | 8.82 |
| HORVU6Hr1G067660.4 | Barley | plastid | 9.43 | 6.65 |
Protein Annotations
| KEGG:00240+2.4.2.9 | Gene3D:3.40.50.2020 | MapMan:6.2.2.2 | UniProt:A0A287G759 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004845 | GO:GO:0006139 | GO:GO:0006223 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009116 | GO:GO:0009987 | GO:GO:0016740 | EnsemblPlantsGene:HORVU1Hr1G072750 | EnsemblPlants:HORVU1Hr1G072750.2 | PFAM:PF14681 |
| InterPro:PRTase-like | InterPro:PRibTrfase_dom | PANTHER:PTHR10285 | PANTHER:PTHR10285:SF46 | SUPFAM:SSF53271 | TIGRFAMs:TIGR01091 |
| UniParc:UPI000B465156 | InterPro:Ura_phspho_trans | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:498780357..498783833
Molecular Weight (calculated)
33611.9 Da
IEP (calculated)
9.699
GRAVY (calculated)
0.113
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: PPYPTVAPFT ALAFARFHPL TALAMPSPAT ATAAAAGAPL HRRPCAPRRP AQASPCSLAA RAVVESARHP VPTPLLARRP RPSLAVARAA SPDAATGARS
101: PGSGGQMLVF VPPHPLIKHW VSVLRNEQTP CAVFRSAMAE LGRLLIYEAS RDWLPTITGE IQTPVAVSSV EFIDPREPVM VVPILRAGLA LAENASSILP
201: ATKTYHLGLR RDEETLQPSV YLNNLPEKIP EGTRVLVIDP MLATGGTIVA AVELLVDRGV TSKQIKVVSA VAAPPALQKL SNKFPGLHVY AGMIDSEVDE
301: RGYIVPGLGD AGDRSFAT
101: PGSGGQMLVF VPPHPLIKHW VSVLRNEQTP CAVFRSAMAE LGRLLIYEAS RDWLPTITGE IQTPVAVSSV EFIDPREPVM VVPILRAGLA LAENASSILP
201: ATKTYHLGLR RDEETLQPSV YLNNLPEKIP EGTRVLVIDP MLATGGTIVA AVELLVDRGV TSKQIKVVSA VAAPPALQKL SNKFPGLHVY AGMIDSEVDE
301: RGYIVPGLGD AGDRSFAT
001: MACSIGNAFR CSSDTLRFAP RQQCSSRLNP NPSSFLSFNS SPILAQNLGA SSSSLSRRTI RARTKMAASE ASINGSNRML VFVPPHPLIK HWISVLRNEQ
101: TPCPVFRNAI AELGRLLMYE ASREWLPTVV GEIMSPMGPA SVEFIDPREP IAVVPILRAG LALAEHASSV LPANKIYHLG VSRDEKTLLP SVYLNKLPDE
201: FPKNSRVFLV DPVLATGGTI MAAMDLLKER GLSVQQIKVI CAIAAPPALS KLNEKFPGLH VYAGIIDPEV NEKGYIIPGL GDAGDRSFGT ETHWVK
101: TPCPVFRNAI AELGRLLMYE ASREWLPTVV GEIMSPMGPA SVEFIDPREP IAVVPILRAG LALAEHASSV LPANKIYHLG VSRDEKTLLP SVYLNKLPDE
201: FPKNSRVFLV DPVLATGGTI MAAMDLLKER GLSVQQIKVI CAIAAPPALS KLNEKFPGLH VYAGIIDPEV NEKGYIIPGL GDAGDRSFGT ETHWVK
Arabidopsis Description
UPPUracil phosphoribosyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M336]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.