Factsheet for Zm00001d038362_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 20089766
extracellular: 20408568
plastid: 22065420
plastid: 23198870

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19635	Sorghum	plastid	93.45	93.45
Os05t0455700-02	Rice	plastid	80.69	77.74
TraesCS1A01G281700.1	Wheat	plastid	78.62	77.29
TraesCS1D01G280900.1	Wheat	plastid	78.62	77.29
TraesCS1B01G290800.1	Wheat	plastid	78.28	76.95
HORVU1Hr1G072750.2	Barley	plasma membrane	77.59	70.75
Zm00001d024109_P001	Maize	cytosol	46.9	59.65
Zm00001d016489_P001	Maize	cytosol	4.48	20.0
Zm00001d006084_P003	Maize	cytosol	25.17	14.66
Zm00001d031602_P002	Maize	cytosol	23.45	13.91
Zm00001d033026_P001	Maize	cytosol	2.76	13.79
Zm00001d054105_P012	Maize	cytosol	22.41	11.86
Zm00001d045018_P001	Maize	cytosol	3.79	9.73
Zm00001d017711_P001	Maize	plastid	10.0	7.16
Zm00001d000164_P001	Maize	plastid	10.0	6.99
Zm00001d002454_P002	Maize	plastid	9.31	6.47

Protein Annotations

KEGG:00240+2.4.2.9	EntrezGene:100284489	Gene3D:3.40.50.2020	MapMan:6.2.2.2	ProteinID:AQK86428.1	UniProt:B4FR28
EMBL:BT039566	EMBL:EU962861	EMBL:EU964289	EMBL:EU965340	EMBL:EU968554	EMBL:EU968709
GO:GO:0003674	GO:GO:0003824	GO:GO:0004845	GO:GO:0006139	GO:GO:0006223	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009987	GO:GO:0016740	GO:GO:0016757
PFAM:PF14681	InterPro:PRTase-like	InterPro:PRibTrfase_dom	PANTHER:PTHR10285	PANTHER:PTHR10285:SF46	SUPFAM:SSF53271
TIGRFAMs:TIGR01091	UniParc:UPI00017B7B8F	InterPro:Ura_phspho_trans	EnsemblPlantsGene:Zm00001d038362	EnsemblPlants:Zm00001d038362_P002	EnsemblPlants:Zm00001d038362_T002
SEG:seg	:	:	:	:	:

Description

Uracil phosphoribosyltransferase chloroplastic

Coordinates

chr6:+:155594061..155597951

Molecular Weight (calculated)

31251.3 Da

IEP (calculated)

8.848

GRAVY (calculated)

0.175

Length

290 amino acids

Sequence
(BLAST)

001: MPSPAAAAAA PFHRIACARQ HLPQTRLFFL PSRALLKSDR LTVPAPLRVH ALRLPPTVPR AASHDAATGV RSPTSGGQML VFVPPHPLIK HWVSVLRNEQ
101: TPCVIFKSAM AELGRLLIYE ASRDWLPTIT GEIETPVAVA SVEFIDPREP VLVIPILRAG LALAELASSV LPATKTYHLG FRRDEETLQP SIYLNNLPDK
201: IPEGTRVLVV DPMLATGGTM VAAIDLLIEC GVTSKQIKVI SAIASPPALQ KLNNKFPGLH VYTGMIDPEV NEKGFIVPGL GDAGDRSFAT

Best Arabidopsis Sequence Match ( AT3G53900.2 )
(BLAST)

001: MACSIGNAFR CSSDTLRFAP RQQCSSRLNP NPSSFLSFNS SPILAQNLGA SSSSLSRRTI RARTKMAASE ASINGSNRML VFVPPHPLIK HWISVLRNEQ
101: TPCPVFRNAI AELGRLLMYE ASREWLPTVV GEIMSPMGPA SVEFIDPREP IAVVPILRAG LALAEHASSV LPANKIYHLG VSRDEKTLLP SVYLNKLPDE
201: FPKNSRVFLV DPVLATGGTI MAAMDLLKER GLSVQQIKVI CAIAAPPALS KLNEKFPGLH VYAGIIDPEV NEKGYIIPGL GDAGDRSFGT ETHWVK

Arabidopsis Description

UPPUracil phosphoribosyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M336]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.