Factsheet for Zm00001d002454_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d038652_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32060.1	Zm00001d038652_P003	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12777	Sorghum	plastid	80.1	86.3
Solyc08g076220.2.1	Tomato	plastid	66.67	69.5
Zm00001d017711_P001	Maize	plastid	67.15	69.14
Bra033861.1-P	Field mustard	plastid	65.47	69.11
VIT_02s0109g00080.t01	Wine grape	plastid	67.39	68.87
PGSC0003DMT400024090	Potato	cytosol, extracellular, plastid	66.67	68.64
Bra023235.1-P	Field mustard	plastid	65.23	68.51
Zm00001d000164_P001	Maize	plastid	67.87	68.19
AT1G32060.1	Thale cress	plastid	64.51	68.1
Os04t0596900-00	Rice	extracellular, plasma membrane	65.47	67.91
KRH39632	Soybean	nucleus, plastid	65.71	67.32
KRH74288	Soybean	nucleus, plastid	65.71	67.32
GSMUA_Achr2P09720_001	Banana	cytosol	15.83	65.35
CDY35538	Canola	plastid	49.64	64.89
GSMUA_Achr1P23890_001	Banana	plastid	63.31	64.86
Zm00001d016489_P001	Maize	cytosol	2.4	15.38
Zm00001d031602_P002	Maize	cytosol	16.31	13.91
Zm00001d006084_P003	Maize	cytosol	16.31	13.65
Zm00001d054105_P012	Maize	cytosol	16.55	12.59
Zm00001d045018_P001	Maize	cytosol	2.88	10.62
Zm00001d033026_P001	Maize	cytosol	1.44	10.34
Zm00001d038362_P002	Maize	plastid	6.47	9.31
Zm00001d024109_P001	Maize	cytosol	5.04	9.21

Protein Annotations

KEGG:00710+2.7.1.19	MapMan:1.2.11	EntrezGene:100281866	Gene3D:3.40.50.300	UniProt:A0A1D6E0T9	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0008974	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
ProteinID:ONM14337.1	InterPro:P-loop_NTPase	PFAM:PF00485	PRINTS:PR00478	InterPro:PRK	InterPro:PRK/URK
PANTHER:PTHR10285	PANTHER:PTHR10285:SF120	SUPFAM:SSF52540	UniParc:UPI000844D5B0	EnsemblPlantsGene:Zm00001d002454	EnsemblPlants:Zm00001d002454_P002
EnsemblPlants:Zm00001d002454_T002	SEG:seg	:	:	:	:

Description

Phosphoribulokinase

Coordinates

chr2:+:13187123..13189193

Molecular Weight (calculated)

45958.4 Da

IEP (calculated)

8.270

GRAVY (calculated)

-0.130

Length

417 amino acids

Sequence
(BLAST)

001: MAAFTVHTSA ATSPYSPAGT AILLRSRSRA YPTATIRVSC SKTVVIGVAA DSGCGKTTFT RRLASVLGGG AEPPRAGRNP GSNTLVSDTT TVICLDDYHS
101: LDRVGRKAKG VTALDPRFVD FDLMYEQVRA IKEGRAVEKP VYNHVTGLLD PPELITPPNI LVIKGLHPMF DERVRDLLDF SIYLDISNEV KLAWKIQVRC
201: VVETWESVVG TALRASRPPS RQGSPTSKLT LVKACRQPCI CTPKIRKSKC RAECSSSSCC CAEPQKQYAD AVIEVLPTQL IPGDDECKVV RVKLIMKEGV
301: EHFAPVHLFD EGSTVYWIPC GRKLSCSYPG IRFAYGFDTY FGHEVSVVEM DGQFDKLDEL IYVETHLSNL STKFYGEVTQ QMLRHADVPG SNNGTGLFQT
401: IVGLKIRDLY EQIVARR

Best Arabidopsis Sequence Match ( AT1G32060.1 )
(BLAST)

001: MAVSTIYSTQ ALNSTHFLTS SSSSKQVFLY RRQPQTNRRF NTLITCAQET IVIGLAADSG CGKSTFMRRL TSVFGGAAKP PKGGNPDSNT LISDTTTVIC
101: LDDYHSLDRY GRKEQKVTAL DPRANDFDLM YEQVKALKNG IAVEKPIYNH VTGLLDPPEL IQPPKILVIE GLHPMFDERV RDLLDFSIYL DISNEVKFAW
201: KIQRDMAERG HSLESIKASI EARKPDFDAF IDPQKQYADA VIEVLPTTLI PDDNEGKVLR VRLIMKEGVK YFSPVYLFDE GSTISWIPCG RKLTCSYPGI
301: KFNYEPDSYF DHEVSVLEMD GQFDRLDELI YVESHLSNLS TKFYGEVTQQ MLKHADFPGS NNGTGLFQTI VGLKIRDLYE QLIANKATAR AEAKA

Arabidopsis Description

PRKPhosphoribulokinase [Source:UniProtKB/TrEMBL;Acc:A0A178WLP9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.