Factsheet for Zm00001d017711_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 20089766
plastid: 22065420
plastid: 23198870

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0698000-01	Rice	extracellular, plastid	92.59	93.05
KXG30947	Sorghum	plastid	95.56	92.81
Zm00001d000164_P001	Maize	plastid	93.58	91.33
TraesCS6D01G247400.1	Wheat	plastid	90.86	91.09
TraesCS6A01G267300.1	Wheat	plastid	90.37	90.59
TraesCS6B01G294700.1	Wheat	plastid	90.37	90.59
HORVU6Hr1G067660.4	Barley	plastid	91.36	82.04
Zm00001d002454_P002	Maize	plastid	69.14	67.15
Zm00001d031602_P002	Maize	cytosol	19.01	15.75
Zm00001d006084_P003	Maize	cytosol	19.01	15.46
Zm00001d054105_P012	Maize	cytosol	18.77	13.87
Zm00001d016489_P001	Maize	cytosol	2.22	13.85
Zm00001d045018_P001	Maize	cytosol	3.7	13.27
Zm00001d024109_P001	Maize	cytosol	6.17	10.96
Zm00001d038362_P002	Maize	plastid	7.16	10.0
Zm00001d033026_P001	Maize	cytosol	1.23	8.62

Protein Annotations

KEGG:00710+2.7.1.19	MapMan:1.2.11	EntrezGene:100282845	Gene3D:3.40.50.300	ProteinID:AQK73795.1	UniProt:B4FQ59
EMBL:BT039247	EMBL:BT041474	EMBL:EU962495	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008974
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	InterPro:P-loop_NTPase	PFAM:PF00485
PRINTS:PR00478	InterPro:PRK	InterPro:PRK/URK	ScanProsite:PS00567	PANTHER:PTHR10285	PANTHER:PTHR10285:SF120
SUPFAM:SSF52540	UniParc:UPI00017B7A89	EnsemblPlantsGene:Zm00001d017711	EnsemblPlants:Zm00001d017711_P001	EnsemblPlants:Zm00001d017711_T001	SEG:seg

Description

Phosphoribulokinase

Coordinates

chr5:+:204910256..204912526

Molecular Weight (calculated)

44752.4 Da

IEP (calculated)

6.123

GRAVY (calculated)

-0.287

Length

405 amino acids

Sequence
(BLAST)

001: MAICSAHTTT SLRSPCTTVS NAGLRQKQVI FVTSNRRSGG GRRHGGARSF QVSCSVDKPV VIGLAADSGC GKSTFMRRLT SVFGGAAEPP KGGNPDSNTL
101: ISDTTTVICL DDYHSLDRNG RKEKGVTALD PRANNFDLMY EQVKAIKEGQ AVEKPIYNHV TGLLDPPELI APPKIFVIEG LHPMFDERVR DLLDFSIYLD
201: ISDEVKFAWK IQRDMAERGH SLESIKASIE ARKPDFDAFI DPQKQYADAV IEVLPTQLIP DDNEGKVLRV KLIMKEGVKN FNPVYLFDEG STISWVPCGR
301: KLTCSYPGIK FSYGPDTYFG NEVSVLEMDG QFDRLDELIY VESHLSNLST KFYGEVTQQM LKHADFPGSN NGTGLFQTII GLKIRDLYEQ IVAERAGVPA
401: EAAKV

Best Arabidopsis Sequence Match ( AT1G32060.1 )
(BLAST)

001: MAVSTIYSTQ ALNSTHFLTS SSSSKQVFLY RRQPQTNRRF NTLITCAQET IVIGLAADSG CGKSTFMRRL TSVFGGAAKP PKGGNPDSNT LISDTTTVIC
101: LDDYHSLDRY GRKEQKVTAL DPRANDFDLM YEQVKALKNG IAVEKPIYNH VTGLLDPPEL IQPPKILVIE GLHPMFDERV RDLLDFSIYL DISNEVKFAW
201: KIQRDMAERG HSLESIKASI EARKPDFDAF IDPQKQYADA VIEVLPTTLI PDDNEGKVLR VRLIMKEGVK YFSPVYLFDE GSTISWIPCG RKLTCSYPGI
301: KFNYEPDSYF DHEVSVLEMD GQFDRLDELI YVESHLSNLS TKFYGEVTQQ MLKHADFPGS NNGTGLFQTI VGLKIRDLYE QLIANKATAR AEAKA

Arabidopsis Description

PRKPhosphoribulokinase [Source:UniProtKB/TrEMBL;Acc:A0A178WLP9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.