CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017711_P001	Maize	plastid	92.81	95.56
Os02t0698000-01	Rice	extracellular, plastid	89.21	92.31
Zm00001d000164_P001	Maize	plastid	90.17	90.6
TraesCS6D01G247400.1	Wheat	plastid	86.57	89.36
TraesCS6A01G267300.1	Wheat	plastid	86.09	88.86
TraesCS6B01G294700.1	Wheat	plastid	86.09	88.86
HORVU6Hr1G067660.4	Barley	plastid	87.05	80.49
EES12777	Sorghum	plastid	71.46	77.0
EES15317	Sorghum	plastid	18.7	16.39
EER99151	Sorghum	cytosol	18.47	15.71
KXG24145	Sorghum	cytosol	17.75	15.68
KXG29238	Sorghum	mitochondrion	18.23	12.73
KXG25691	Sorghum	cytosol	6.71	11.34
EES19635	Sorghum	plastid	7.43	10.69

Protein Annotations

KEGG:00710+2.7.1.19	MapMan:1.2.11	Gene3D:3.40.50.300	UniProt:A0A194YRX7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0008974	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	EnsemblPlants:KXG30947
ProteinID:KXG30947	ProteinID:KXG30947.1	InterPro:P-loop_NTPase	PFAM:PF00485	PRINTS:PR00478	InterPro:PRK
InterPro:PRK/URK	ScanProsite:PS00567	PANTHER:PTHR10285	PANTHER:PTHR10285:SF120	MetaCyc:PWY-5723	EnsemblPlantsGene:SORBI_3004G272100
SUPFAM:SSF52540	UniParc:UPI0001C80C41	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:61605083..61607066

Molecular Weight (calculated)

45873.6 Da

IEP (calculated)

6.509

GRAVY (calculated)

-0.247

Length

417 amino acids

Sequence
(BLAST)

001: MAICSAHTTT TSLHSPCTTT VSNAAGFRQR QVIFFTSSSN RRSCGGGGGG RRHHGGARTS CFQVSCSVDK PVVIGLAADS GCGKSTFMRR LTSVFGGAAV
101: PPKGGNPDSN TLISDTTTVI CLDDYHSLDR NGRKEYGVTA LDPRANNFDL MYEQVKAIKD GQAVEKPIYN HVTGLLDPPE LITPPKIFVI EGLHPMFDQR
201: VRDLLDFSIY LDISDEVKFA WKIQRDMAER GHSLESIQAS IEARKPDFDA YIDPQKQYAD AVIEVLPTQL IPGDNEGKVL RVKLIMKEGV KFFNPVYLFD
301: EGSSISWVPC GRKLTCSYPG IKFAYGPDTY FGKEVSVLEM DGQFDKLDEL IYVESHLSNL STKFYGEVTQ QMLKHADFPG SNNGTGLFQT IIGLKIRDLY
401: EQIVAERAGV PAEAAKV

Best Arabidopsis Sequence Match ( AT1G32060.1 )
(BLAST)

001: MAVSTIYSTQ ALNSTHFLTS SSSSKQVFLY RRQPQTNRRF NTLITCAQET IVIGLAADSG CGKSTFMRRL TSVFGGAAKP PKGGNPDSNT LISDTTTVIC
101: LDDYHSLDRY GRKEQKVTAL DPRANDFDLM YEQVKALKNG IAVEKPIYNH VTGLLDPPEL IQPPKILVIE GLHPMFDERV RDLLDFSIYL DISNEVKFAW
201: KIQRDMAERG HSLESIKASI EARKPDFDAF IDPQKQYADA VIEVLPTTLI PDDNEGKVLR VRLIMKEGVK YFSPVYLFDE GSTISWIPCG RKLTCSYPGI
301: KFNYEPDSYF DHEVSVLEMD GQFDRLDELI YVESHLSNLS TKFYGEVTQQ MLKHADFPGS NNGTGLFQTI VGLKIRDLYE QLIANKATAR AEAKA

Arabidopsis Description

PRKPhosphoribulokinase [Source:UniProtKB/TrEMBL;Acc:A0A178WLP9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.