Factsheet for TraesCS6A01G267300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 22160430
plastid: 23683508

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

msms PMID: 23683508 doi

ZH He, HW Li, Y Shen, ZS Li, H Mi

National Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 300 Fenglin Road, Shanghai 200032, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G294700.1	Wheat	plastid	99.5	99.5
TraesCS6D01G247400.1	Wheat	plastid	99.5	99.5
Os02t0698000-01	Rice	extracellular, plastid	92.08	92.31
Zm00001d017711_P001	Maize	plastid	90.59	90.37
HORVU6Hr1G067660.4	Barley	plastid	98.76	88.47
KXG30947	Sorghum	plastid	88.86	86.09
Zm00001d000164_P001	Maize	plastid	87.13	84.82
TraesCS4A01G213800.1	Wheat	cytosol	19.06	15.75
TraesCS7A01G259200.2	Wheat	cytosol	18.81	15.54
TraesCS5A01G285300.1	Wheat	cytosol	18.07	14.84
TraesCS1A01G281700.1	Wheat	plastid	7.18	9.83

Protein Annotations

KEGG:00710+2.7.1.19	MapMan:1.2.11	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008974
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	InterPro:P-loop_NTPase	PFAM:PF00485	PRINTS:PR00478
InterPro:PRK	InterPro:PRK/URK	ScanProsite:PS00567	PANTHER:PTHR10285	PANTHER:PTHR10285:SF120	SUPFAM:SSF52540
EnsemblPlantsGene:TraesCS6A01G267300	EnsemblPlants:TraesCS6A01G267300.1	TIGR:cd02026	SEG:seg	:	:

Description

No Description!

Coordinates

chr6A:+:492803932..492805818

Molecular Weight (calculated)

45095.8 Da

IEP (calculated)

5.911

GRAVY (calculated)

-0.300

Length

404 amino acids

Sequence
(BLAST)

001: MAFCSPHSTT SLRSPCTTIP NSGFRQNQVI LFTTRSSRRS NTRHGARTFQ VSCAVEQPIV IGLAADSGCG KSTFMRRLTS VFGGAAEPPK GGNPDSNTLI
101: SDTTTVICLD DYHSLDRTGR KEKGVTALDP KANDFDLMYE QVKAIKEGKA IEKPIYNHVT GLLDPAELIQ PPKIFVIEGL HPMYDERVRE LLDFSIYLDI
201: SNEVKFAWKI QRDMAERGHS LESIKASIEA RKPDFDAFID PQKQYADAVI EVLPTQLIPD DNEGKVLRVK LIMKEGIKFF NPVYLFDEGS TINWIPCGRK
301: LTCSYPGIKF SYGPDTYFGQ EVSVLEMDGQ FDRLDELIYV ESHLSNLSTK FYGEVTQQML KHADFPGSNN GTGLFQTIVG LKIRDLYEQI IAERAGVPAE
401: AAKV

Best Arabidopsis Sequence Match ( AT1G32060.1 )
(BLAST)

001: MAVSTIYSTQ ALNSTHFLTS SSSSKQVFLY RRQPQTNRRF NTLITCAQET IVIGLAADSG CGKSTFMRRL TSVFGGAAKP PKGGNPDSNT LISDTTTVIC
101: LDDYHSLDRY GRKEQKVTAL DPRANDFDLM YEQVKALKNG IAVEKPIYNH VTGLLDPPEL IQPPKILVIE GLHPMFDERV RDLLDFSIYL DISNEVKFAW
201: KIQRDMAERG HSLESIKASI EARKPDFDAF IDPQKQYADA VIEVLPTTLI PDDNEGKVLR VRLIMKEGVK YFSPVYLFDE GSTISWIPCG RKLTCSYPGI
301: KFNYEPDSYF DHEVSVLEMD GQFDRLDELI YVESHLSNLS TKFYGEVTQQ MLKHADFPGS NNGTGLFQTI VGLKIRDLYE QLIANKATAR AEAKA

Arabidopsis Description

PRKPhosphoribulokinase [Source:UniProtKB/TrEMBL;Acc:A0A178WLP9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.