Factsheet for TraesCS4A01G213800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G098900.1	Wheat	cytosol	99.18	99.18
TraesCS4B01G102200.1	Wheat	cytosol	98.98	98.98
HORVU4Hr1G043970.12	Barley	cytosol	93.46	92.32
Os11t0265000-01	Rice	cytosol	89.98	89.61
KXG24145	Sorghum	cytosol	83.23	86.23
CDY50103	Canola	cytosol	56.24	83.59
Solyc10g005880.2.1	Tomato	cytosol	70.55	81.75
Solyc07g065890.2.1	Tomato	cytosol, plastid	72.39	79.37
GSMUA_Achr4P15950_001	Banana	cytosol	75.46	78.68
PGSC0003DMT400037253	Potato	cytosol	74.03	77.52
GSMUA_Achr8P34310_001	Banana	cytosol	74.03	77.35
VIT_19s0015g01730.t01	Wine grape	cytosol	75.26	76.83
Zm00001d054105_P012	Maize	cytosol	86.09	76.82
KRH46433	Soybean	cytosol	74.64	76.52
KRG98430	Soybean	cytosol	74.44	76.31
CDY17380	Canola	cytosol	72.19	75.43
Bra002854.1-P	Field mustard	cytosol	72.19	75.43
CDY28618	Canola	cytosol	71.98	75.21
AT4G26510.2	Thale cress	cytosol	71.78	74.84
Bra026427.1-P	Field mustard	cytosol	71.57	74.47
Bra030832.1-P	Field mustard	cytosol	67.89	73.78
KRH14188	Soybean	cytosol, nucleus	71.98	73.64
CDY42388	Canola	cytosol	70.76	73.46
CDY10528	Canola	cytosol	68.71	73.04
KXG29238	Sorghum	mitochondrion	88.96	72.86
KRH73945	Soybean	cytosol	70.76	72.84
AT1G55810.5	Thale cress	cytosol	71.98	72.13
GSMUA_AchrUn_...	Banana	cytosol	66.46	70.96
TraesCS7A01G259200.2	Wheat	cytosol	65.85	65.85
TraesCS5A01G285300.1	Wheat	cytosol	64.42	64.02
CDX94320	Canola	cytosol	69.73	39.2
TraesCS1A01G281700.1	Wheat	plastid	11.86	19.66
TraesCS6A01G267300.1	Wheat	plastid	15.75	19.06
Bra026426.1-P	Field mustard	cytosol	0.82	1.12

Protein Annotations

KEGG:00240+2.7.1.48	KEGG:00983+2.7.1.48	Gene3D:3.40.50.2020	Gene3D:3.40.50.300	MapMan:6.2.2.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009116	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	InterPro:P-loop_NTPase
PFAM:PF00485	PFAM:PF14681	PRINTS:PR00988	InterPro:PRK/URK	InterPro:PRTase-like	InterPro:PRibTrfase_dom
PANTHER:PTHR10285	PANTHER:PTHR10285:SF97	SUPFAM:SSF52540	SUPFAM:SSF53271	TIGRFAMs:TIGR00235	EnsemblPlantsGene:TraesCS4A01G213800
EnsemblPlants:TraesCS4A01G213800.1	InterPro:Uridine_kinase-like	TIGR:cd02023	TIGR:cd06223	SEG:seg	:

Description

No Description!

Coordinates

chr4A:+:512012996..512023533

Molecular Weight (calculated)

54529.9 Da

IEP (calculated)

6.955

GRAVY (calculated)

-0.085

Length

489 amino acids

Sequence
(BLAST)

001: MGSYSTSEVL NAAAVGVHHP ALRLHELDLK GSMSAEELPT TSGLENGHQA PFVIGVAGGA SSGKSTVCKM IIDQLCDQRV VVVTQESFYY GLSDEELVHV
101: HDYNFDHPDA FDTDLLLSCM EKLKHGKAVD IPSYDFKTHK SISCARKVNP SDVIILEGIL LFHDSRVRDL MNMKIFVDTD ADVRLTRRIR RDTIEKGRDI
201: IAVLDQYSKF VKTAFEDFIL PTKKYADIII PRGADNSVAI DLIVQHIRTK LGQNDLCKIH PNLYVIQTTY QIRGMHTIIR DAATTTHDFI FYADRLIRLV
301: VEHGLGHLPF REKQVITPTG SVYTGVDFSK SLCGISVIRS GESMENALRA CCKGIKIGKI LIHREGDDGK QLIYHNLPKD IAKRHVLLLD PILGTGNSAV
401: QAISLLLEKR VQEANIIFLN LISAPQGVHV VSKRFPRVKI VTSEIELGLN DDFRVIPGMG EFGDRYFGTD DYQSSTPFFA DDKNRVGLL

Best Arabidopsis Sequence Match ( AT1G55810.6 )
(BLAST)

001: MASKSDVNII ETSSKVHFSG FHQMDGLASN RPEQMAEEEE HGQPFVIGVA GGAASGKTTV CDMIMQQLHD QRAVVVNQDS FYHNVNEVEL VRVHDYNFDH
101: PDAFDTEQLL SSMEKLRKGQ AVDIPNYDFK SYKNNVFPPR RVNPSDVIIL EGILIFHDPR VRDLMNMKIF VDADADVRLA RRIKRDTVEK GRDIATVLDQ
201: YSKFVKPAFE DFILPTKKYA DIIIPRGGDN HVAIDLIVQH IHTKLGQHDL CKIYPNLYVI QSTFQIRGMH TLIRDSKTTK HDFIFYSDRL IRLVVEHGLG
301: HLPFTEKQVV TPTGSVYSGV DFCKKLCGVS VIRSGESMEN ALRACCKGIK IGKILIHREG DNGQQLIYEK LPSDISERHV LLLDPILGTG NSAVQAIRLL
401: ISKGVPESNI IFLNLISAPE GVNVVCKKFP RIKIVTSEIE LGLNDEFRVV PGMGEFGDRY FGTDDE

Arabidopsis Description

UKL3uridine kinase-like 3 [Source:TAIR;Acc:AT1G55810]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.