Factsheet for Solyc10g005880.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50103	Canola	cytosol	69.67	89.36
Solyc07g065890.2.1	Tomato	cytosol, plastid	92.65	87.67
PGSC0003DMT400037253	Potato	cytosol	96.45	87.15
VIT_19s0015g01730.t01	Wine grape	cytosol	91.47	80.58
KRH46433	Soybean	cytosol	90.52	80.08
KRG98430	Soybean	cytosol	90.52	80.08
Bra030832.1-P	Field mustard	cytosol	84.36	79.11
CDY42388	Canola	cytosol	87.91	78.77
AT4G26510.2	Thale cress	cytosol	87.44	78.68
CDY10528	Canola	cytosol	85.31	78.26
KRH14188	Soybean	cytosol, nucleus	88.63	78.24
CDY28618	Canola	cytosol	86.73	78.21
Bra002854.1-P	Field mustard	cytosol	86.49	77.99
CDY17380	Canola	cytosol	86.49	77.99
KRH73945	Soybean	cytosol	87.68	77.89
Bra026427.1-P	Field mustard	cytosol	86.02	77.23
AT1G55810.5	Thale cress	cytosol	88.39	76.43
GSMUA_Achr4P15950_001	Banana	cytosol	84.6	76.12
GSMUA_Achr8P34310_001	Banana	cytosol	82.7	74.57
Solyc02g067880.1.1	Tomato	cytosol	77.49	73.48
KXG24145	Sorghum	cytosol	80.57	72.03
GSMUA_AchrUn_...	Banana	cytosol	77.25	71.18
Os11t0265000-01	Rice	cytosol	82.7	71.08
TraesCS4A01G213800.1	Wheat	cytosol	81.75	70.55
TraesCS4D01G098900.1	Wheat	cytosol	81.52	70.35
TraesCS4B01G102200.1	Wheat	cytosol	81.52	70.35
Solyc06g065580.2.1	Tomato	cytosol	79.86	69.77
HORVU4Hr1G043970.12	Barley	cytosol	78.91	67.27
Zm00001d054105_P012	Maize	cytosol	80.81	62.23
KXG29238	Sorghum	mitochondrion	82.23	58.12
CDX94320	Canola	cytosol	84.12	40.8
Solyc09g011300.2.1	Tomato	plastid	14.46	21.33
Solyc03g063860.1.1	Tomato	cytosol	5.92	17.36
Solyc08g076220.2.1	Tomato	plastid	15.4	16.25
Bra026426.1-P	Field mustard	cytosol	0.95	1.12

Protein Annotations

KEGG:00240+2.7.1.48	KEGG:00983+2.7.1.48	Gene3D:3.40.50.2020	Gene3D:3.40.50.300	MapMan:6.2.2.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004849	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006206
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0043097	GO:GO:0044206	GO:GO:0044211	UniProt:K4CXC0
InterPro:P-loop_NTPase	PFAM:PF00485	PFAM:PF14681	PRINTS:PR00988	InterPro:PRK/URK	InterPro:PRTase-like
InterPro:PRibTrfase_dom	PANTHER:PTHR10285	PANTHER:PTHR10285:SF97	SUPFAM:SSF52540	SUPFAM:SSF53271	EnsemblPlantsGene:Solyc10g005880.2
EnsemblPlants:Solyc10g005880.2.1	TIGRFAMs:TIGR00235	UniParc:UPI000276CB74	InterPro:Uridine_kinase-like	SEG:seg	:

Description

Uridine kinase [Source:UniProtKB/TrEMBL;Acc:K4CXC0]

Coordinates

chr10:+:674706..683027

Molecular Weight (calculated)

47671.6 Da

IEP (calculated)

6.611

GRAVY (calculated)

-0.154

Length

422 amino acids

Sequence
(BLAST)

001: MDGRVAGGAA SGKTTVCDLI IDQLHDQRVV LVNQDSFYQN LTPEELTKVH EYNFDHPDAF DTEQLLCVME KLKHGQAVDI PKYDFKSYKN DAFPLRRVNP
101: SDVIILEGIL IFHDPLVRDL MSMKIFVDTD ADVRLARRIR RDTVEKNRDI ATVLDQYSKF VKPAFDDFIL PTKKYADIII PRGGDNHVAI DLIVQHIRTK
201: LGQHDLCKIY SSLYVIQSTF QIRGMHTLIR DAQTTKHDFI FYADRLIRLV VEHGLGHLPF TEKQVITPTG SVYSGVDFCK RLCGVSVIRS GESMENALRA
301: CCKGIKIGKI LIHREGDNGQ QLIYEKLPED IAERHVLLLD PILGTGNSAV QAISLLLKKG VPESNILFLN LISAPQGVHV VCKHFPRIKI VTSEIENGLN
401: DEYRVIPGMG EFGDRYFGTD DD

Best Arabidopsis Sequence Match ( AT1G55810.6 )
(BLAST)

001: MASKSDVNII ETSSKVHFSG FHQMDGLASN RPEQMAEEEE HGQPFVIGVA GGAASGKTTV CDMIMQQLHD QRAVVVNQDS FYHNVNEVEL VRVHDYNFDH
101: PDAFDTEQLL SSMEKLRKGQ AVDIPNYDFK SYKNNVFPPR RVNPSDVIIL EGILIFHDPR VRDLMNMKIF VDADADVRLA RRIKRDTVEK GRDIATVLDQ
201: YSKFVKPAFE DFILPTKKYA DIIIPRGGDN HVAIDLIVQH IHTKLGQHDL CKIYPNLYVI QSTFQIRGMH TLIRDSKTTK HDFIFYSDRL IRLVVEHGLG
301: HLPFTEKQVV TPTGSVYSGV DFCKKLCGVS VIRSGESMEN ALRACCKGIK IGKILIHREG DNGQQLIYEK LPSDISERHV LLLDPILGTG NSAVQAIRLL
401: ISKGVPESNI IFLNLISAPE GVNVVCKKFP RIKIVTSEIE LGLNDEFRVV PGMGEFGDRY FGTDDE

Arabidopsis Description

UKL3uridine kinase-like 3 [Source:TAIR;Acc:AT1G55810]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.