Factsheet for VIT_19s0015g01730.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g005880.2.1	Tomato	cytosol	80.58	91.47
CDY50103	Canola	cytosol	62.42	90.88
PGSC0003DMT400037253	Potato	cytosol	87.27	89.51
Solyc07g065890.2.1	Tomato	cytosol, plastid	83.09	89.24
KRH46433	Soybean	cytosol	88.1	88.47
KRG98430	Soybean	cytosol	88.1	88.47
KRH14188	Soybean	cytosol, nucleus	87.06	87.24
AT4G26510.2	Thale cress	cytosol	85.18	86.99
CDY28618	Canola	cytosol	84.55	86.54
Bra002854.1-P	Field mustard	cytosol	84.34	86.32
CDY17380	Canola	cytosol	84.34	86.32
KRH73945	Soybean	cytosol	84.97	85.68
Bra026427.1-P	Field mustard	cytosol	83.72	85.32
Bra030832.1-P	Field mustard	cytosol	79.75	84.89
CDY42388	Canola	cytosol	82.88	84.29
CDY10528	Canola	cytosol	80.58	83.91
GSMUA_Achr4P15950_001	Banana	cytosol	81.42	83.16
AT1G55810.5	Thale cress	cytosol	83.72	82.17
GSMUA_Achr8P34310_001	Banana	cytosol	79.54	81.41
KXG24145	Sorghum	cytosol	75.78	76.91
Os11t0265000-01	Rice	cytosol	78.08	76.17
VIT_14s0171g00090.t01	Wine grape	cytosol	75.99	75.52
TraesCS4A01G213800.1	Wheat	cytosol	76.83	75.26
TraesCS4B01G102200.1	Wheat	cytosol	76.83	75.26
TraesCS4D01G098900.1	Wheat	cytosol	76.83	75.26
VIT_17s0000g01620.t01	Wine grape	cytosol	73.28	74.36
GSMUA_AchrUn_...	Banana	cytosol	70.15	73.36
HORVU4Hr1G043970.12	Barley	cytosol	74.53	72.12
VIT_17s0000g01600.t01	Wine grape	cytosol	31.73	66.96
Zm00001d054105_P012	Maize	cytosol	76.2	66.61
KXG29238	Sorghum	mitochondrion	78.5	62.98
CDX94320	Canola	cytosol	82.25	45.29
VIT_14s0066g00270.t01	Wine grape	endoplasmic reticulum, golgi	67.01	31.23
VIT_08s0007g01100.t01	Wine grape	cytosol	12.73	26.87
VIT_16s0039g02140.t01	Wine grape	plastid	15.03	17.65
VIT_02s0109g00080.t01	Wine grape	plastid	14.82	17.4
Bra026426.1-P	Field mustard	cytosol	1.46	1.96

Protein Annotations

KEGG:00240+2.7.1.48	KEGG:00983+2.7.1.48	EntrezGene:100259975	wikigene:100259975	Gene3D:3.40.50.2020	Gene3D:3.40.50.300
MapMan:6.2.2.1	ProteinID:CBI39852	ProteinID:CBI39852.3	UniProt:D7UAT7	EMBL:FN596747	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004849	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006206
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0043097	GO:GO:0044206	GO:GO:0044211	EntrezGene:LOC100259975
wikigene:LOC100259975	InterPro:P-loop_NTPase	PFAM:PF00485	PFAM:PF14681	PRINTS:PR00988	InterPro:PRK/URK
InterPro:PRTase-like	InterPro:PRibTrfase_dom	PANTHER:PTHR10285	PANTHER:PTHR10285:SF97	SUPFAM:SSF52540	SUPFAM:SSF53271
TIGR:TC59360	TIGRFAMs:TIGR00235	UniParc:UPI00015CC8BF	InterPro:Uridine_kinase-like	ArrayExpress:VIT_19s0015g01730	EnsemblPlantsGene:VIT_19s0015g01730
EnsemblPlants:VIT_19s0015g01730.t01	unigene:Vvi.2073	RefSeq:XP_002263911	RefSeq:XP_002263911.1	SEG:seg	:

Description

Uridine kinase [Source:UniProtKB/TrEMBL;Acc:D7UAT7]

Coordinates

chr19:-:10402253..10419777

Molecular Weight (calculated)

53733.8 Da

IEP (calculated)

6.328

GRAVY (calculated)

-0.152

Length

479 amino acids

Sequence
(BLAST)

001: MGSKSVVDLI EASSGVHYSG FHLDGLEPRN TEVEQPSTSA AESVHKQPFV IGVAGGAASG KTTVCDMIIE QLHDQRVVLV NQDSFYNNLT EEELARVHEY
101: NFDHPDAFDT EQLLCAMEKL KHGQAVDIPK YDFKSYKNNV FPARRVNPSD VIILEGILIF HDLRVRELMN MKIFVDTDAD VRLARRIRRD TVEKGRDIGM
201: VLDQYSKFVK PAFDDFILPT KKYADIIIPR GGDNHVAIDL IVQHIRTKLG QHDLCKIYPN LYVIQSTFQI RGMHTLIRDA QTTKHDFVFY ADRLIRLVVE
301: HGLGHLPFTE KQVITPTESV YSGVDFCKRL CGVSVIRSGE SMENALRACC KGIKIGKILI HREGDNGQQL IYEKLPKDIS DRHVLLLDPV LGTGNSAVQA
401: ISLLIQKGVP ESNIIFLNLI SAPQGVHVVC KSFPRIKIVT SEIDVGLNED FRVIPGMGEF GDRYFGTDDD DQQLVAPPL

Best Arabidopsis Sequence Match ( AT4G26510.1 )
(BLAST)

001: MGSKSVVDMI EAASRAHFSG LHVNGHMNGL EPSALKETTS ASEDIQRQPF VIGVAGGAAS GKTTVCDMII QQLHDQRVVL INLDSFYHNL TEEELARVHE
101: YNFDHPDAFD TEHLLSCMEK LRQGQAVDIP KYDFKTYRSS VFRRVNPTDV IILEGILLFH DPRVRKLMNM KIFVCTDADV RLARRIKRDT VENGRDIGTV
201: LDQYSKFVKP AFDDFILPTK KYADIIIPRG GDNHVAIDLI VQHICTKLGQ HDLCKIYPNL YVIHSTFQIR GMHTLIRDSQ TTKHDFVFYS DRLIRLVVEH
301: GLGHLPFTEK QVITPTGCVY SGVDFCKRLC GVSVIRSGES MENALRACCK GIKIGKILIH REGDNGQQLV YEKLPNDISE RHVLLLDPIL GTGNSAVEAI
401: NLLISKGVPE GNIIFLNLIS APQGVHVVCK KFPRIKIVTS EIDNGLNEEF RVIPGMGEFG DRYFGTDDD

Arabidopsis Description

UKL4Uridine kinase-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O65583]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.