Factsheet for PGSC0003DMT400037253

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g005880.2.1	Tomato	cytosol	87.15	96.45
CDY50103	Canola	cytosol	62.74	89.06
VIT_19s0015g01730.t01	Wine grape	cytosol	89.51	87.27
KRH46433	Soybean	cytosol	86.72	84.91
KRG98430	Soybean	cytosol	86.3	84.49
CDY28618	Canola	cytosol	84.15	83.97
Bra002854.1-P	Field mustard	cytosol	83.94	83.76
CDY17380	Canola	cytosol	83.94	83.76
KRH14188	Soybean	cytosol, nucleus	85.44	83.47
KRH73945	Soybean	cytosol	84.58	83.16
AT4G26510.2	Thale cress	cytosol	83.51	83.16
Bra030832.1-P	Field mustard	cytosol	80.09	83.11
CDY42388	Canola	cytosol	83.3	82.59
Bra026427.1-P	Field mustard	cytosol	82.87	82.34
CDY10528	Canola	cytosol	80.94	82.17
GSMUA_Achr4P15950_001	Banana	cytosol	81.16	80.81
AT1G55810.5	Thale cress	cytosol	83.3	79.71
GSMUA_Achr8P34310_001	Banana	cytosol	79.23	79.06
PGSC0003DMT400017925	Potato	cytosol	60.39	78.99
KXG24145	Sorghum	cytosol	77.09	76.27
Os11t0265000-01	Rice	cytosol	79.23	75.36
TraesCS4A01G213800.1	Wheat	cytosol	77.52	74.03
TraesCS4B01G102200.1	Wheat	cytosol	77.52	74.03
TraesCS4D01G098900.1	Wheat	cytosol	77.52	74.03
PGSC0003DMT400067208	Potato	cytosol, plastid	75.59	72.78
GSMUA_AchrUn_...	Banana	cytosol	70.02	71.4
HORVU4Hr1G043970.12	Barley	cytosol	74.95	70.71
Zm00001d054105_P012	Maize	cytosol	77.52	66.06
KXG29238	Sorghum	mitochondrion	79.02	61.81
CDX94320	Canola	cytosol	80.94	43.45
PGSC0003DMT400022940	Potato	cytosol	5.57	20.0
PGSC0003DMT400024090	Potato	cytosol, extracellular, plastid	15.63	18.02
Bra026426.1-P	Field mustard	cytosol	0.86	1.12

Protein Annotations

KEGG:00240+2.7.1.48	KEGG:00983+2.7.1.48	EntrezGene:102604082	Gene3D:3.40.50.2020	Gene3D:3.40.50.300	MapMan:6.2.2.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004849	GO:GO:0005488	GO:GO:0005524
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0044206	GO:GO:0044211	UniProt:M1B530
InterPro:P-loop_NTPase	PFAM:PF00485	PFAM:PF14681	EnsemblPlantsGene:PGSC0003DMG400014372	PGSC:PGSC0003DMG400014372	EnsemblPlants:PGSC0003DMT400037253
PRINTS:PR00988	InterPro:PRK/URK	InterPro:PRTase-like	InterPro:PRibTrfase_dom	PANTHER:PTHR10285	PANTHER:PTHR10285:SF97
SUPFAM:SSF52540	SUPFAM:SSF53271	TIGRFAMs:TIGR00235	UniParc:UPI0002953D9E	InterPro:Uridine_kinase-like	RefSeq:XP_006352545.1
RefSeq:XP_015166457.1	SEG:seg	:	:	:	:

Description

Uridine kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400014372]

Coordinates

chr10:+:912734..922546

Molecular Weight (calculated)

52578.4 Da

IEP (calculated)

6.640

GRAVY (calculated)

-0.185

Length

467 amino acids

Sequence
(BLAST)

001: MGSKAVEDLI QASSGVHYSG FHLEEPHTSE IGQPTTSIDE RVKQPFVIGV AGGAASGKTT VCDLIIDQLH DQRVVLVNQD SFYHNLTPEE LTKVHEYNFD
101: HPDAFDTEQL LCVMEKLKHG QAVDIPKYDF KSNKNDVFPL RRVNPSDVTI LEGILIFHDP RVRDLMSMKI FVDTDADVRL ARRIRRDTVE KNRDIATILD
201: QYSKFVKPAF DDFILPTKKY ADVIIPRGGD NHVAIDLIVQ HIRTKLGQHD LCKIYPNLYV IQSTFQIRGM HTLIRDAQTT KHDFIFYADR LIRLVVEHGL
301: GHLPFTEKQV ITPTGSVYSG VDFCKRLCGV SVIRSGESME NALRACCKGI KIGKILIHRE GDNGQQLIYE KLPEDIAQRH VLLLDPILGT GNSAVQAISL
401: LLKKGVPESN ILFLNLISAP QGVHVVCKRF PRIKIVTSEI EIGLNDEYRV IPGMGEFGDR YFGTDDD

Best Arabidopsis Sequence Match ( AT1G55810.6 )
(BLAST)

001: MASKSDVNII ETSSKVHFSG FHQMDGLASN RPEQMAEEEE HGQPFVIGVA GGAASGKTTV CDMIMQQLHD QRAVVVNQDS FYHNVNEVEL VRVHDYNFDH
101: PDAFDTEQLL SSMEKLRKGQ AVDIPNYDFK SYKNNVFPPR RVNPSDVIIL EGILIFHDPR VRDLMNMKIF VDADADVRLA RRIKRDTVEK GRDIATVLDQ
201: YSKFVKPAFE DFILPTKKYA DIIIPRGGDN HVAIDLIVQH IHTKLGQHDL CKIYPNLYVI QSTFQIRGMH TLIRDSKTTK HDFIFYSDRL IRLVVEHGLG
301: HLPFTEKQVV TPTGSVYSGV DFCKKLCGVS VIRSGESMEN ALRACCKGIK IGKILIHREG DNGQQLIYEK LPSDISERHV LLLDPILGTG NSAVQAIRLL
401: ISKGVPESNI IFLNLISAPE GVNVVCKKFP RIKIVTSEIE LGLNDEFRVV PGMGEFGDRY FGTDDE

Arabidopsis Description

UKL3uridine kinase-like 3 [Source:TAIR;Acc:AT1G55810]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.