Factsheet for PGSC0003DMT400067208

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g065580.2.1	Tomato	cytosol	99.18	99.59
KRH06964	Soybean	cytosol, nucleus	87.01	89.03
KRG94497	Soybean	nucleus	86.8	88.45
AT5G40870.1	Thale cress	cytosol, plastid	85.98	85.8
CDY28487	Canola	cytosol	85.36	85.71
VIT_17s0000g01620.t01	Wine grape	cytosol	83.3	85.59
CDY34172	Canola	cytosol	85.15	85.51
AT3G27190.1	Thale cress	cytosol	85.15	85.51
Bra032986.1-P	Field mustard	cytosol	85.15	85.51
CDY52697	Canola	cytosol	84.33	85.21
Bra025537.1-P	Field mustard	cytosol	84.33	85.21
Zm00001d016489_P001	Maize	cytosol	11.34	84.62
GSMUA_Achr5P25140_001	Banana	cytosol	83.71	84.41
CDY36391	Canola	cytosol	84.54	84.36
CDY13688	Canola	cytosol	83.92	84.27
CDX83666	Canola	cytosol	83.71	84.06
Bra025256.1-P	Field mustard	cytosol	83.71	84.06
KRH03946	Soybean	cytosol, plastid	76.7	81.76
TraesCS7D01G260200.1	Wheat	cytosol	77.73	79.2
EER99151	Sorghum	cytosol	79.79	78.98
Os08t0530000-01	Rice	plasma membrane	79.79	78.82
TraesCS7B01G157000.1	Wheat	cytosol	77.32	78.45
EES15317	Sorghum	plastid	76.91	78.36
Os09t0505800-01	Rice	plasma membrane	80.0	78.23
TraesCS7A01G259200.2	Wheat	cytosol	78.35	77.71
Zm00001d006084_P003	Maize	cytosol	79.18	77.11
TraesCS5B01G284500.1	Wheat	cytosol	77.32	76.53
TraesCS5A01G285300.1	Wheat	cytosol	77.32	76.22
PGSC0003DMT400037253	Potato	cytosol	72.78	75.59
PGSC0003DMT400017925	Potato	cytosol	54.85	74.51
Zm00001d031602_P002	Maize	cytosol	75.05	74.44
CDX89330	Canola	cytosol	71.96	74.26
HORVU7Hr1G053940.14	Barley	cytosol	71.75	73.11
TraesCS5D01G292700.1	Wheat	plastid	76.91	72.43
KRH57219	Soybean	cytosol	15.88	70.64
HORVU5Hr1G076150.7	Barley	cytosol	77.11	69.91
KRH49620	Soybean	cytosol	16.29	63.71
KRH26216	Soybean	cytosol	17.32	56.38
KRH05211	Soybean	cytosol	21.44	52.79
CDY13403	Canola	cytosol	14.23	49.64
KRH25953	Soybean	cytosol	20.21	45.79
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane, plastid	9.07	44.0
HORVU4Hr1G025660.3	Barley	cytosol	18.35	43.63
PGSC0003DMT400022940	Potato	cytosol	6.8	25.38
PGSC0003DMT400024090	Potato	cytosol, extracellular, plastid	15.46	18.52
CDX89329	Canola	cytosol	0.82	1.12

Protein Annotations

KEGG:00240+2.4.2.9+2.7.1.48	KEGG:00240+2.7.1.48	KEGG:00983+2.7.1.48	EntrezGene:102601516	Gene3D:3.40.50.2020	Gene3D:3.40.50.300
MapMan:6.2.2.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004849	GO:GO:0005488
GO:GO:0005524	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0044206	GO:GO:0044211
UniProt:M1CGV9	InterPro:P-loop_NTPase	PFAM:PF00485	PFAM:PF14681	EnsemblPlantsGene:PGSC0003DMG400026129	PGSC:PGSC0003DMG400026129
EnsemblPlants:PGSC0003DMT400067208	PRINTS:PR00988	InterPro:PRK/URK	InterPro:PRTase-like	InterPro:PRibTrfase_dom	PANTHER:PTHR10285
PANTHER:PTHR10285:SF115	SUPFAM:SSF52540	SUPFAM:SSF53271	TIGRFAMs:TIGR00235	InterPro:UCKL_plant	UniParc:UPI0002961893
InterPro:Uridine_kinase-like	RefSeq:XP_006353646.1	SEG:seg	:	:	:

Description

Uracil phosphoribosyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400026129]

Coordinates

chr6:+:46258410..46267762

Molecular Weight (calculated)

54289.4 Da

IEP (calculated)

6.760

GRAVY (calculated)

-0.149

Length

485 amino acids

Sequence
(BLAST)

001: MSPVPEETTA IDYVMEAASG AHFSGLRVDG LLTSSSSSPR ASPTPTPTHF STPTPLDSTA LKQPFVIGVS GGTASGKTTV CDMIIQQLHD HRVVLINQDS
101: FYRGLTLEEM KHVHEYNFDH PDAFDTEQLL ECVEKLKSGM SVQVPIYDFK THQRCSDSFR QVNASDVIIL EGILVFHDAR VRNLMSMKIF VDTDADVRLA
201: RRIRRDTVER GRDINSVLEQ YAKFVKPAFD DFVLPSKKYA DVIIPRGGDN HVAIDLIVQH IRTKLGQHDL CKIYPNVYVI QSTFQIRGMH TLIRDKEISK
301: HDFVFYSDRL IRLVVEHGLG HLPFTEKQIV TPTGSVYTGV DFCKKLCGVS IIRSGESMEN ALRACCKGIK IGKILIHRDG DNGKQLIYEK LPKDISERHV
401: LLLDPVLATG NSANQAIELL IQKGVPESHI IFLNLISAPE GIHCVCKRFP SLKIVTSEID LSLNEEYRVI PGLGEFGDRY FGTDD

Best Arabidopsis Sequence Match ( AT5G40870.1 )
(BLAST)

001: MPEDSSSLDY AMEKASGPHF SGLRFDGLLS SSPPNSSVVS SLRSAVSSSS PSSSDPEAPK QPFIIGVSGG TASGKTTVCD MIIQQLHDHR VVLVNQDSFY
101: RGLTSEELQR VQEYNFDHPD AFDTEQLLHC AETLKSGQPY QVPIYDFKTH QRRSDTFRQV NASDVIILEG ILVFHDSRVR NLMNMKIFVD TDADVRLARR
201: IRRDTVERGR DVNSVLEQYA KFVKPAFDDF VLPSKKYADV IIPRGGDNHV AVDLITQHIH TKLGQHDLCK IYPNVYVIQS TFQIRGMHTL IREKDISKHD
301: FVFYSDRLIR LVVEHGLGHL PFTEKQVVTP TGAVYTGVDF CKKLCGVSII RSGESMENAL RACCKGIKIG KILIHRDGDN GKQLIYEKLP HDISERHVLL
401: LDPVLATGNS ANQAIELLIQ KGVPEAHIIF LNLISAPEGI HCVCKRFPAL KIVTSEIDQC LNQEFRVIPG LGEFGDRYFG TDEEDQ

Arabidopsis Description

UKL1Uridine kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UHR6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.