CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025256.1-P	Field mustard	cytosol	99.17	99.17
CDY13688	Canola	cytosol	99.17	99.17
CDY28487	Canola	cytosol	94.2	94.2
CDY34172	Canola	cytosol	94.0	94.0
AT3G27190.1	Thale cress	cytosol	93.79	93.79
CDY52697	Canola	cytosol	87.16	87.71
CDY36391	Canola	cytosol	86.96	86.42
VIT_14s0171g00090.t01	Wine grape	cytosol	84.89	85.06
Solyc06g065580.2.1	Tomato	cytosol	84.27	84.27
PGSC0003DMT400067208	Potato	cytosol, plastid	84.06	83.71
CDY50103	Canola	cytosol	56.31	82.67
CDY28618	Canola	cytosol	71.43	73.72
CDY17380	Canola	cytosol	71.43	73.72
CDX89330	Canola	cytosol	71.64	73.62
CDY42388	Canola	cytosol	70.39	72.19
CDY10528	Canola	cytosol	68.12	71.52
CDY00155	Canola	cytosol	67.29	71.27
CDY07890	Canola	cytosol	12.01	61.05
CDY70546	Canola	cytosol	12.01	61.05
CDY54439	Canola	cytosol	11.59	58.95
CDX97201	Canola	cytosol	7.87	50.67
CDY13403	Canola	cytosol	13.66	47.48
CDX75814	Canola	endoplasmic reticulum, extracellular	6.0	40.28
CDX94320	Canola	cytosol	70.19	38.97
CDY20046	Canola	cytosol	67.91	37.88
CDX73515	Canola	cytosol	10.77	30.06
CDY70621	Canola	plastid	6.42	23.85
CDY54029	Canola	plastid	13.87	23.18
CDY59158	Canola	plastid	13.04	21.88
CDX67576	Canola	plastid	12.84	21.45
CDY22582	Canola	plastid	15.32	18.64
CDY41745	Canola	plastid	15.32	18.45
CDY59208	Canola	plastid	15.11	18.39
CDX84108	Canola	plastid	15.11	18.2
CDY07734	Canola	plastid	2.9	17.95
CDY35538	Canola	plastid	10.35	15.67
CDX94369	Canola	cytosol, plastid, vacuole	3.73	14.52
CDY07735	Canola	plastid	6.42	11.36
CDY72083	Canola	cytosol	1.04	7.81
CDX89329	Canola	cytosol	0.83	1.12

Protein Annotations

KEGG:00240+2.4.2.9+2.7.1.48	KEGG:00240+2.7.1.48	KEGG:00983+2.7.1.48	Gene3D:3.40.50.2020	Gene3D:3.40.50.300	MapMan:6.2.2.1
GO:A0A078D2Q6	EnsemblPlants:CDX83666	ProteinID:CDX83666	ProteinID:CDX83666.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004849	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0044206	GO:GO:0044211	EnsemblPlantsGene:GSBRNA2T00139363001	InterPro:P-loop_NTPase	PFAM:PF00485	PFAM:PF14681
PRINTS:PR00988	InterPro:PRK/URK	InterPro:PRTase-like	InterPro:PRibTrfase_dom	PANTHER:PTHR10285	PANTHER:PTHR10285:SF115
MetaCyc:PWY-7183	MetaCyc:PWY-7193	SUPFAM:SSF52540	SUPFAM:SSF53271	TIGRFAMs:TIGR00235	InterPro:UCKL_plant
UniPathway:UPA00574	UniPathway:UPA00579	UniParc:UPI0001CDD6D1	InterPro:Uridine_kinase-like	SEG:seg	:

Description

BnaC07g24060D

Coordinates

chrLK031833:-:1482174..1485948

Molecular Weight (calculated)

54217.1 Da

IEP (calculated)

6.463

GRAVY (calculated)

-0.189

Length

483 amino acids

Sequence
(BLAST)

001: MPEDSTSIDY VMEKASGPHF SGLRLDGLLS SPSKSTNSSP SPFRSGVPSF SQISDPAAPN QPFVIGVTGG TASGKTTVCD MIIQQLHDHR IVLVNQDSFY
101: RGLTSEELER AQEYNFDHPD AFDTEQLLHC IDTLKSGQPY QIPIYDFKTH QRKSDAFRQV NACDVIILEG ILVFHDSRVR DLMNMKIFVD TDADVRLARR
201: IRRDTVERGR DVDSVLEQYA KFVKPAFDDF VLPSKKYADV IIPRGGDNHV AVDLIVQHIH TKLGQHDLCK IYPNLFVIQS TFQIRGMHTL IREKDISKHD
301: FVFYSDRLIR LVVEHGLGHL PFTEKQVVTP TGSVYSGVDF CKKLCGVSII RSGESMENAL RACCKGIKIG KILIHREGDN GMQLIYEKLP SDISERHVLL
401: LDPVLGTGNC ASQAIELLIR KGVPESHIIF LNLISAPEGI HCICKRFPLL KIVTSEIDQC LNEDFRVIPG LGEYGDRYFG TDE

Best Arabidopsis Sequence Match ( AT3G27190.1 )
(BLAST)

001: MPEDSTAIDY VMEKASGPHF SGLRLDGLLS SPSKSSVSSP SHFRLSNSSF SATDDPAAPH QPFVIGVTGG TASGKTTVCD MIIQQLHDHR IVLVNQDSFY
101: RGLTSEELEH VQEYNFDHPD AFDTEQLLHC VDILKSGQPY QIPIYDFKTH QRKVDAFRQV NACDVIILEG ILVFHDSRVR DLMNMKIFVD TDADVRLARR
201: IRRDTVERGR DVDSVLEQYA KFVKPAFDDF VLPSKKYADV IIPRGGDNHV AVDLIVQHIH TKLGQHDLCK IYPNVFVIET TFQIRGMHTL IREKDISKHD
301: FVFYSDRLIR LVVEHGLGHL PFTEKQVVTP TGSVYSGVDF CKKLCGVSVI RSGESMENAL RACCKGIKIG KILIHRDGDN GMQLIYEKLP SDISERHVLL
401: LDPVLGTGNS ANQAIELLIQ KGVPEAHIIF LNLISAPEGI HCVCKRFPKL KIVTSEIDQC LNEEFRVIPG LGEFGDRYFG TDE

Arabidopsis Description

UKL2Uridine kinase-like protein 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LK34]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.