CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41745	Canola	plastid	99.0	99.0
CDY59208	Canola	plastid	96.26	97.23
CDY22582	Canola	plastid	95.76	96.73
CDY35538	Canola	plastid	69.58	87.46
PGSC0003DMT400024090	Potato	cytosol, extracellular, plastid	84.79	83.95
Solyc08g076220.2.1	Tomato	plastid	83.54	83.75
KRH74288	Soybean	nucleus, plastid	84.54	83.29
KRH39632	Soybean	nucleus, plastid	84.54	83.29
VIT_02s0109g00080.t01	Wine grape	plastid	83.29	81.86
CDY52697	Canola	cytosol	18.95	15.83
CDY34172	Canola	cytosol	18.95	15.73
CDY28487	Canola	cytosol	18.7	15.53
CDY36391	Canola	cytosol	18.7	15.43
CDY00155	Canola	cytosol	17.46	15.35
CDY17380	Canola	cytosol	17.71	15.17
CDX83666	Canola	cytosol	18.2	15.11
CDY13688	Canola	cytosol	18.2	15.11
CDY28618	Canola	cytosol	17.46	14.96
CDX89330	Canola	cytosol	17.46	14.89
CDY50103	Canola	cytosol	12.22	14.89
CDY10528	Canola	cytosol	16.71	14.57
CDY42388	Canola	cytosol	16.96	14.44
CDY13403	Canola	cytosol	4.99	14.39
CDY70621	Canola	plastid	4.49	13.85
CDX73515	Canola	cytosol	5.24	12.14
CDX97201	Canola	cytosol	2.24	12.0
CDY07890	Canola	cytosol	2.74	11.58
CDX94369	Canola	cytosol, plastid, vacuole	3.49	11.29
CDX75814	Canola	endoplasmic reticulum, extracellular	2.0	11.11
CDX67576	Canola	plastid	7.73	10.73
CDY54439	Canola	cytosol	2.49	10.53
CDY70546	Canola	cytosol	2.49	10.53
CDY59158	Canola	plastid	7.48	10.42
CDY54029	Canola	plastid	7.48	10.38
CDY20046	Canola	cytosol	17.71	8.2
CDY07735	Canola	plastid	5.49	8.06
CDX94320	Canola	cytosol	17.21	7.93
CDY72083	Canola	cytosol	1.25	7.81
CDY07734	Canola	plastid	1.5	7.69
CDX89329	Canola	cytosol	1.0	1.12

Protein Annotations

KEGG:00710+2.7.1.19	MapMan:1.2.11	Gene3D:3.40.50.300	GO:A0A078D9U9	EnsemblPlants:CDX84108	ProteinID:CDX84108
ProteinID:CDX84108.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0008974	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00140086001	InterPro:P-loop_NTPase	PFAM:PF00485	PRINTS:PR00478	InterPro:PRK
InterPro:PRK/URK	ScanProsite:PS00567	PANTHER:PTHR10285	PANTHER:PTHR10285:SF120	MetaCyc:PWY-5723	SUPFAM:SSF52540
UniPathway:UPA00116	UniParc:UPI0004EECFAF	SEG:seg	:	:	:

Description

BnaC08g07850D

Coordinates

chrLK031835:-:1500497..1502644

Molecular Weight (calculated)

44932.6 Da

IEP (calculated)

5.866

GRAVY (calculated)

-0.276

Length

401 amino acids

Sequence
(BLAST)

001: MAVSTIYSTR ALNSTHFLTS SPSSSTSKQV FFYRRHQSQT NRRFNTIITC AAQQTVVIGL AADSGCGKST FMRRLTSVFG GAAEPPKGGN PDSNTLISDM
101: TTVICLDDYH SLDRTGRKEK GVTALDPRAN DFDLMYEQVK ALKSSIAVEK PIYNHVTGLL DAPELIQPPK ILVIEGLHPM FDERVRELLD FSIYLDISNE
201: VKFAWKIQRD MAERGHSLES IKASIEARKP DFDAFIDPQK QYADAVIEVL PTQLIPDDNE GKVLRVRLIM KEGVKYFSPV YLFDEGSTIS WIPCGRKLTC
301: SYPGIKLNYE PDTYFDHEVS VLEMDGQFDR LDELIYVESH LSNLSSKFYG EVTQQMLKHA DFPGSNNGTG LFQTIVGLKI RDLYEQLIAN KATAPAEIAK
401: A

Best Arabidopsis Sequence Match ( AT1G32060.1 )
(BLAST)

001: MAVSTIYSTQ ALNSTHFLTS SSSSKQVFLY RRQPQTNRRF NTLITCAQET IVIGLAADSG CGKSTFMRRL TSVFGGAAKP PKGGNPDSNT LISDTTTVIC
101: LDDYHSLDRY GRKEQKVTAL DPRANDFDLM YEQVKALKNG IAVEKPIYNH VTGLLDPPEL IQPPKILVIE GLHPMFDERV RDLLDFSIYL DISNEVKFAW
201: KIQRDMAERG HSLESIKASI EARKPDFDAF IDPQKQYADA VIEVLPTTLI PDDNEGKVLR VRLIMKEGVK YFSPVYLFDE GSTISWIPCG RKLTCSYPGI
301: KFNYEPDSYF DHEVSVLEMD GQFDRLDELI YVESHLSNLS TKFYGEVTQQ MLKHADFPGS NNGTGLFQTI VGLKIRDLYE QLIANKATAR AEAKA

Arabidopsis Description

PRKPhosphoribulokinase [Source:UniProtKB/TrEMBL;Acc:A0A178WLP9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.