CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum

Predictor Summary:

extracellular 5
golgi 4
plasma membrane 4
endoplasmic reticulum 5
vacuole 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07890	Canola	cytosol	47.22	35.79
CDY70546	Canola	cytosol	47.22	35.79
CDY54439	Canola	cytosol	45.83	34.74
CDX97201	Canola	cytosol	23.61	22.67
CDY50103	Canola	cytosol	38.89	8.51
CDY00155	Canola	cytosol	51.39	8.11
CDX73515	Canola	cytosol	16.67	6.94
CDY52697	Canola	cytosol	44.44	6.67
CDY36391	Canola	cytosol	44.44	6.58
CDY34172	Canola	cytosol	43.06	6.42
CDY28487	Canola	cytosol	43.06	6.42
CDY17380	Canola	cytosol	40.28	6.2
CDY28618	Canola	cytosol	40.28	6.2
CDX89330	Canola	cytosol	40.28	6.17
CDY10528	Canola	cytosol	38.89	6.09
CDX83666	Canola	cytosol	40.28	6.0
CDY13688	Canola	cytosol	40.28	6.0
CDY42388	Canola	cytosol	38.89	5.94
CDY72083	Canola	cytosol	4.17	4.69
CDY54029	Canola	plastid	18.06	4.5
CDY20046	Canola	cytosol	51.39	4.27
CDY59158	Canola	plastid	16.67	4.17
CDX67576	Canola	plastid	16.67	4.15
CDX94320	Canola	cytosol	40.28	3.33
CDY35538	Canola	plastid	11.11	2.51
CDX94369	Canola	cytosol, plastid, vacuole	4.17	2.42
CDY59208	Canola	plastid	11.11	2.02
CDY22582	Canola	plastid	11.11	2.02
CDY41745	Canola	plastid	11.11	2.0
CDX84108	Canola	plastid	11.11	2.0
CDY07734	Canola	plastid	1.39	1.28
CDY07735	Canola	plastid	4.17	1.1
CDX89329	Canola	cytosol	1.39	0.28
CDY13403	Canola	cytosol	0.0	0.0
CDY70621	Canola	plastid	0.0	0.0
Zm00001d033026_P001	Maize	cytosol	0.0	0.0
Zm00001d045018_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDX75814	EnsemblPlantsGene:GSBRNA2T00123771001	Gene3D:3.40.50.2020	GO:A0A078CIB2	KEGG:00240+2.4.2.9+2.7.1.48	KEGG:00983+2.7.1.48
MetaCyc:PWY-7183	MetaCyc:PWY-7193	PANTHER:PTHR10285	PANTHER:PTHR10285:SF75	PFAM:PF14681	ProteinID:CDX75814
ProteinID:CDX75814.1	UniParc:UPI0004EF2BB7	UniPathway:UPA00574	UniPathway:UPA00579	MapMan:50.2.4	:

Description

BnaC03g38970D

Coordinates

chrLK031805:+:886488..886856

Molecular Weight (calculated)

8170.4 Da

IEP (calculated)

9.985

GRAVY (calculated)

0.415

Length

72 amino acids

Sequence
(BLAST)

1: MLYLISLLIS KGVPESHIIF LNVIAAPQGI HGLCKKHPMV WENSQTITLV QTTQKSIKNI QECRLLRSIF LI

Best Arabidopsis Sequence Match ( AT3G27440.3 )
(BLAST)

001: MIMSQLHDQR VVLVNQDSFY HSLTKEKLNK VHEYNFDHPD AFNTEVLLSC MEKLRSGQPV NIPSYDFKIH QSIESSSPVN PGDVIILEGI LVLNDPRVRD
101: LMNMKIFVDT DADVRLSRRI QRDTVERGRN IQNVLEQYTK FVKPSFDEYI QPSMKYADII IPRGGDNDVA IDLIVQHIRT KLCQHNLCKI YSNIFIISST
201: FQIKGMHTLI RDINTTKHDF VFYADRLIRL VVEHGLGHLP FTEKQITTPT GSVYTGVDFC KRLCGVSVIR SGESMENALR ACCNGIKIGK ILIHRENNDG
301: RQLIYEKLPK DISSRHVFLL DPVLASGYSA VKAITLLLSK GVPESHIIFL NLIAAPQGIH ALCKKFPMLK IVTSEIDSSL NEDSRVIPGL GEFADRYFGT
401: NNINSKVSSL STNLKLRS

Arabidopsis Description

UKL5Uridine kinase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTY6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.