CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002854.1-P	Field mustard	cytosol	100.0	100.0
CDY50103	Canola	cytosol	70.09	99.7
CDY28618	Canola	cytosol	99.36	99.36
CDX89330	Canola	cytosol	89.96	89.57
Solyc10g005880.2.1	Tomato	cytosol	77.99	86.49
VIT_19s0015g01730.t01	Wine grape	cytosol	86.32	84.34
PGSC0003DMT400037253	Potato	cytosol	83.76	83.94
Solyc07g065890.2.1	Tomato	cytosol, plastid	79.7	83.63
KRH46433	Soybean	cytosol	84.83	83.23
KRH14188	Soybean	cytosol, nucleus	84.83	83.05
KRG98430	Soybean	cytosol	84.62	83.02
KRH73945	Soybean	cytosol	83.76	82.53
CDY42388	Canola	cytosol	82.69	82.17
CDY10528	Canola	cytosol	80.34	81.74
GSMUA_Achr4P15950_001	Banana	cytosol	78.63	78.46
GSMUA_Achr8P34310_001	Banana	cytosol	77.56	77.56
KXG24145	Sorghum	cytosol	75.0	74.36
Os11t0265000-01	Rice	cytosol	76.07	72.51
TraesCS4D01G098900.1	Wheat	cytosol	75.64	72.39
TraesCS4A01G213800.1	Wheat	cytosol	75.43	72.19
TraesCS4B01G102200.1	Wheat	cytosol	75.43	72.19
CDY00155	Canola	cytosol	70.09	71.93
CDY28487	Canola	cytosol	74.15	71.84
CDY13688	Canola	cytosol	73.93	71.64
CDY34172	Canola	cytosol	73.72	71.43
CDX83666	Canola	cytosol	73.72	71.43
CDY52697	Canola	cytosol	72.86	71.04
GSMUA_AchrUn_...	Banana	cytosol	69.23	70.74
CDY36391	Canola	cytosol	73.08	70.37
HORVU4Hr1G043970.12	Barley	cytosol	72.86	68.89
Zm00001d054105_P012	Maize	cytosol	75.0	64.05
CDY70546	Canola	cytosol	12.39	61.05
CDY07890	Canola	cytosol	12.39	61.05
CDY54439	Canola	cytosol	12.18	60.0
KXG29238	Sorghum	mitochondrion	76.5	59.97
CDY13403	Canola	cytosol	17.73	59.71
CDX97201	Canola	cytosol	8.12	50.67
CDX94320	Canola	cytosol	86.97	46.78
CDX75814	Canola	endoplasmic reticulum, extracellular	6.2	40.28
CDY20046	Canola	cytosol	70.94	38.34
CDX73515	Canola	cytosol	10.9	29.48
CDY70621	Canola	plastid	6.41	23.08
CDY54029	Canola	plastid	13.89	22.49
CDY59158	Canola	plastid	12.82	20.83
CDX67576	Canola	plastid	12.61	20.42
CDY41745	Canola	plastid	15.38	17.96
CDY22582	Canola	plastid	15.17	17.88
CDY59208	Canola	plastid	15.17	17.88
CDX84108	Canola	plastid	15.17	17.71
CDY35538	Canola	plastid	10.9	15.99
CDX94369	Canola	cytosol, plastid, vacuole	3.85	14.52
CDY07734	Canola	plastid	2.35	14.1
CDY07735	Canola	plastid	7.05	12.09
CDY72083	Canola	cytosol	1.07	7.81
CDX89329	Canola	cytosol	0.85	1.12

Protein Annotations

KEGG:00240+2.4.2.9+2.7.1.48	KEGG:00240+2.7.1.48	KEGG:00983+2.7.1.48	Gene3D:3.40.50.2020	Gene3D:3.40.50.300	MapMan:6.2.2.1
GO:A0A078FS72	UniProt:A0A078FS72	EnsemblPlants:CDY17380	ProteinID:CDY17380	ProteinID:CDY17380.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004849	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0044206	GO:GO:0044211	EnsemblPlantsGene:GSBRNA2T00095490001	InterPro:P-loop_NTPase
PFAM:PF00485	PFAM:PF14681	PRINTS:PR00988	InterPro:PRK/URK	InterPro:PRTase-like	InterPro:PRibTrfase_dom
PANTHER:PTHR10285	PANTHER:PTHR10285:SF97	MetaCyc:PWY-7183	MetaCyc:PWY-7193	SUPFAM:SSF52540	SUPFAM:SSF53271
TIGRFAMs:TIGR00235	UniPathway:UPA00574	UniPathway:UPA00579	UniParc:UPI0002544848	InterPro:Uridine_kinase-like	SEG:seg

Description

BnaA10g10140DUridine kinase [Source:UniProtKB/TrEMBL;Acc:A0A078FS72]

Coordinates

chrLK032072:-:612138..616322

Molecular Weight (calculated)

52320.1 Da

IEP (calculated)

6.853

GRAVY (calculated)

-0.169

Length

468 amino acids

Sequence
(BLAST)

001: MGSTSKSVVD MIEASSKVHY SGFHMNGHIN GVEPSAALQG TTDIQRQPFV IGVAGGAASG KTSVCDMIIQ QLHDQRVVLV NQDSFYHGLT EDELARVHEY
101: NFDHPDAFDT DHLLSCMEKL RQGQAVDIPK YDFKTYKSSV SRRVNPSDVI LLEGILLFHD PRVRGLMNMK IFVDTDADVR LARRIKRDTS QNDRDIGTVL
201: DQYSKFVKPA FDDFILPTKK YADIIIPRGG DNHVAIDLIV QHICTKLGQH DLCKIYPNLY VIQSTFQIRG MHTLIRDSQT TKHDFVFYSD RLIRLVVEHG
301: LGHLPFSEMQ VITPTGSVYS GVDFCKRLCG VSVIRSGESM ENALRACCKG IKIGKILIHR EGDNGQQLVY EKLPNDISER HVLLLDPILG TGNSAVQAIK
401: LLISKGVPEG NIIFLNLISA PQGVHVVCKK FPRLKIVTSE IEHGLNEEFR VIPGMGEFGD RYFGTDDD

Best Arabidopsis Sequence Match ( AT4G26510.1 )
(BLAST)

001: MGSKSVVDMI EAASRAHFSG LHVNGHMNGL EPSALKETTS ASEDIQRQPF VIGVAGGAAS GKTTVCDMII QQLHDQRVVL INLDSFYHNL TEEELARVHE
101: YNFDHPDAFD TEHLLSCMEK LRQGQAVDIP KYDFKTYRSS VFRRVNPTDV IILEGILLFH DPRVRKLMNM KIFVCTDADV RLARRIKRDT VENGRDIGTV
201: LDQYSKFVKP AFDDFILPTK KYADIIIPRG GDNHVAIDLI VQHICTKLGQ HDLCKIYPNL YVIHSTFQIR GMHTLIRDSQ TTKHDFVFYS DRLIRLVVEH
301: GLGHLPFTEK QVITPTGCVY SGVDFCKRLC GVSVIRSGES MENALRACCK GIKIGKILIH REGDNGQQLV YEKLPNDISE RHVLLLDPIL GTGNSAVEAI
401: NLLISKGVPE GNIIFLNLIS APQGVHVVCK KFPRIKIVTS EIDNGLNEEF RVIPGMGEFG DRYFGTDDD

Arabidopsis Description

UKL4Uridine kinase-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O65583]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.