Factsheet for Solyc07g065890.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g005880.2.1	Tomato	cytosol	87.67	92.65
CDY50103	Canola	cytosol	65.92	89.36
VIT_19s0015g01730.t01	Wine grape	cytosol	89.24	83.09
KRG98430	Soybean	cytosol	88.34	82.6
KRH46433	Soybean	cytosol	87.89	82.18
KRH14188	Soybean	cytosol, nucleus	87.0	81.17
KRH73945	Soybean	cytosol	86.1	80.84
AT4G26510.2	Thale cress	cytosol	84.08	79.96
CDY28618	Canola	cytosol	83.86	79.91
Bra002854.1-P	Field mustard	cytosol	83.63	79.7
CDY17380	Canola	cytosol	83.63	79.7
Bra030832.1-P	Field mustard	cytosol	79.82	79.11
CDY42388	Canola	cytosol	83.18	78.77
Bra026427.1-P	Field mustard	cytosol	82.51	78.3
CDY10528	Canola	cytosol	80.72	78.26
AT1G55810.5	Thale cress	cytosol	84.08	76.84
GSMUA_Achr4P15950_001	Banana	cytosol	80.72	76.76
GSMUA_Achr8P34310_001	Banana	cytosol	79.82	76.07
KXG24145	Sorghum	cytosol	79.15	74.79
Solyc02g067880.1.1	Tomato	cytosol	74.44	74.61
Os11t0265000-01	Rice	cytosol	80.72	73.32
TraesCS4D01G098900.1	Wheat	cytosol	79.37	72.39
TraesCS4B01G102200.1	Wheat	cytosol	79.37	72.39
TraesCS4A01G213800.1	Wheat	cytosol	79.37	72.39
Solyc06g065580.2.1	Tomato	cytosol	77.13	71.22
GSMUA_AchrUn_...	Banana	cytosol	73.09	71.18
HORVU4Hr1G043970.12	Barley	cytosol	76.91	69.29
Zm00001d054105_P012	Maize	cytosol	78.92	64.23
KXG29238	Sorghum	mitochondrion	80.49	60.13
CDX94320	Canola	cytosol	80.27	41.15
Solyc09g011300.2.1	Tomato	plastid	13.9	21.68
Solyc03g063860.1.1	Tomato	cytosol	5.83	18.06
Solyc08g076220.2.1	Tomato	plastid	16.14	18.0
Bra026426.1-P	Field mustard	cytosol	0.9	1.12

Protein Annotations

KEGG:00240+2.7.1.48	KEGG:00983+2.7.1.48	Gene3D:3.40.50.2020	Gene3D:3.40.50.300	MapMan:6.2.2.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004849	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006206
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0043097	GO:GO:0044206	GO:GO:0044211	UniProt:K4CHR5
InterPro:P-loop_NTPase	PFAM:PF00485	PFAM:PF14681	PRINTS:PR00988	InterPro:PRK/URK	InterPro:PRTase-like
InterPro:PRibTrfase_dom	PANTHER:PTHR10285	PANTHER:PTHR10285:SF97	SUPFAM:SSF52540	SUPFAM:SSF53271	EnsemblPlantsGene:Solyc07g065890.2
EnsemblPlants:Solyc07g065890.2.1	TIGRFAMs:TIGR00235	UniParc:UPI000276B07B	InterPro:Uridine_kinase-like	SEG:seg	:

Description

Uridine kinase [Source:UniProtKB/TrEMBL;Acc:K4CHR5]

Coordinates

chr7:+:67485496..67491979

Molecular Weight (calculated)

50488.1 Da

IEP (calculated)

6.720

GRAVY (calculated)

-0.178

Length

446 amino acids

Sequence
(BLAST)

001: MEQPRTPEIE QPTTSIDDSF HKQPFIIGVA GGAASGKTTV CDLIIEQLRD QRVVLVNQDS FYHTLTPEEL TKVHEYNFDH PDAFDTEKLL RVVEELKQGQ
101: AVDIPKYDFK SYKNDVFPLR RVNPSDVIIL EGILIFHDPR VRDLMNMKIF VDTDADVRLA RRIRRDTAEK GRDISMVLDQ YSKFVKAAFD DFILPTKKYA
201: DVIIPRGGDN HVAIDLIVQH IRTKLGQHDL CKIYPNLYVI QSTFQIRGMH TLIRDGHTTK HDFVFYADRL IRLVVEHGLG HLPFTEKQVL TPTGSVYSGV
301: DFCKRLCGVS VIRSGESMEN ALRACCKGIK IGKILIHREG DNGQQLIYEK LPLDIAERHV LLLDPILGTG NSAVQAISLL LKKGVPESNI LFLNLISAPQ
401: GVHVVCKRFP RIKIVTSEIE IGLNDDFRVI PGMGEFGDRY FGTDDD

Best Arabidopsis Sequence Match ( AT1G55810.6 )
(BLAST)

001: MASKSDVNII ETSSKVHFSG FHQMDGLASN RPEQMAEEEE HGQPFVIGVA GGAASGKTTV CDMIMQQLHD QRAVVVNQDS FYHNVNEVEL VRVHDYNFDH
101: PDAFDTEQLL SSMEKLRKGQ AVDIPNYDFK SYKNNVFPPR RVNPSDVIIL EGILIFHDPR VRDLMNMKIF VDADADVRLA RRIKRDTVEK GRDIATVLDQ
201: YSKFVKPAFE DFILPTKKYA DIIIPRGGDN HVAIDLIVQH IHTKLGQHDL CKIYPNLYVI QSTFQIRGMH TLIRDSKTTK HDFIFYSDRL IRLVVEHGLG
301: HLPFTEKQVV TPTGSVYSGV DFCKKLCGVS VIRSGESMEN ALRACCKGIK IGKILIHREG DNGQQLIYEK LPSDISERHV LLLDPILGTG NSAVQAIRLL
401: ISKGVPESNI IFLNLISAPE GVNVVCKKFP RIKIVTSEIE LGLNDEFRVV PGMGEFGDRY FGTDDE

Arabidopsis Description

UKL3uridine kinase-like 3 [Source:TAIR;Acc:AT1G55810]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.