Factsheet for Solyc02g067880.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400017925	Potato	cytosol	78.88	98.32
Solyc10g005880.2.1	Tomato	cytosol	73.48	77.49
Solyc07g065890.2.1	Tomato	cytosol, plastid	74.61	74.44
CDY00155	Canola	cytosol	73.26	71.49
AT3G27440.1	Thale cress	cytosol	73.93	70.75
KRG93941	Soybean	cytosol	70.11	68.27
Solyc06g065580.2.1	Tomato	cytosol	71.46	65.84
CDY07890	Canola	cytosol	11.91	55.79
CDY70546	Canola	cytosol	11.91	55.79
CDY54439	Canola	cytosol	11.46	53.68
Bra039077.1-P	Field mustard	mitochondrion	73.71	41.62
CDY20046	Canola	cytosol	73.71	37.88
VIT_14s0066g00270.t01	Wine grape	endoplasmic reticulum, golgi	71.91	31.13
Solyc09g011300.2.1	Tomato	plastid	14.83	23.08
Solyc03g063860.1.1	Tomato	cytosol	5.84	18.06
Solyc08g076220.2.1	Tomato	plastid	15.28	17.0

Protein Annotations

KEGG:00240+2.7.1.48	KEGG:00983+2.7.1.48	Gene3D:3.40.50.2020	Gene3D:3.40.50.300	MapMan:6.2.2.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004849	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006206
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0043097	GO:GO:0044206	GO:GO:0044211	UniProt:K4B7C0
InterPro:P-loop_NTPase	PFAM:PF00485	PFAM:PF14681	PRINTS:PR00988	InterPro:PRK/URK	InterPro:PRTase-like
InterPro:PRibTrfase_dom	PANTHER:PTHR10285	PANTHER:PTHR10285:SF75	SUPFAM:SSF52540	SUPFAM:SSF53271	EnsemblPlantsGene:Solyc02g067880.1
EnsemblPlants:Solyc02g067880.1.1	TIGRFAMs:TIGR00235	UniParc:UPI0002767744	InterPro:Uridine_kinase-like	SEG:seg	:

Description

Uridine kinase [Source:UniProtKB/TrEMBL;Acc:K4B7C0]

Coordinates

chr2:-:37970317..37973782

Molecular Weight (calculated)

49691.5 Da

IEP (calculated)

8.401

GRAVY (calculated)

-0.065

Length

445 amino acids

Sequence
(BLAST)

001: MDSQMAATTD DAQMVLKVPF VIGVAGGTAS GKTTVCDMII SQLQNQRVVL ISQEAFYHPL TAEQLEKVHE HNFDHPDAFN TELLLSCMEE LKHGRGINIP
101: NYDFKLHRSV EPARVVNPSD VIILDGILIL HDPRLRDFMN MKIFVDSDSD VRLARRIRRD TVERNRNILN VLDQYSKHVK PGFEDFIHPT KKYADVIIPR
201: GADNDVAIDL IVQHIRTKLG QHDLCKIYSN VFVIQSTFQI RGMHTLVRNA KTTKHDFVFY ADRLIRLVVE HGLGHLPFTE KQIITPTGSV YSGVVFCKRL
301: CGVSIIRSGE SMENALRACC KGIKIGKILI HGEGKSGRQL IYEKLPSDIA SRHVLLLDPV LASGNSAVKA ISVLLSKGVP ESNIVFLNLI SAPEGLHTVC
401: NKYPRLKIVT SEIDTTLNKD LHVIPGMGEF GDRYFGTGSR VITPS

Best Arabidopsis Sequence Match ( AT3G27440.1 )
(BLAST)

001: MEKLSNGVRD HCLISDYVSP SAPAPLKQPF VIGVAGGTAS GKTTVCNMIM SQLHDQRVVL VNQDSFYHSL TKEKLNKVHE YNFDHPDAFN TEVLLSCMEK
101: LRSGQPVNIP SYDFKIHQSI ESSSPVNPGD VIILEGILVL NDPRVRDLMN MKIFVDTDAD VRLSRRIQRD TVERGRNIQN VLEQYTKFVK PSFDEYIQPS
201: MKYADIIIPR GGDNDVAIDL IVQHIRTKLC QHNLCKIYSN IFIISSTFQI KGMHTLIRDI NTTKHDFVFY ADRLIRLVVE HGLGHLPFTE KQITTPTGSV
301: YTGVDFCKRL CGVSVIRSGE SMENALRACC NGIKIGKILI HRENNDGRQL IYEKLPKDIS SRHVFLLDPV LASGYSAVKA ITLLLSKGVP ESHIIFLNLI
401: AAPQGIHALC KKFPMLKIVT SEIDSSLNED SRVIPGLGEF ADRYFGTNNI NSKVSSLSTN LKLRS

Arabidopsis Description

UKL5Uridine kinase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTY6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.