CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70546	Canola	cytosol	97.89	97.89
CDY54439	Canola	cytosol	95.79	95.79
CDX97201	Canola	cytosol	52.63	66.67
CDX75814	Canola	endoplasmic reticulum, extracellular	35.79	47.22
CDY50103	Canola	cytosol	61.05	17.63
CDY00155	Canola	cytosol	78.95	16.45
AT3G27440.1	Thale cress	cytosol	75.79	15.48
PGSC0003DMT400017925	Potato	cytosol	55.79	14.85
CDX73515	Canola	cytosol	26.32	14.45
CDY28618	Canola	cytosol	61.05	12.39
CDY17380	Canola	cytosol	61.05	12.39
CDX89330	Canola	cytosol	61.05	12.34
CDX83666	Canola	cytosol	61.05	12.01
CDY34172	Canola	cytosol	61.05	12.01
CDY28487	Canola	cytosol	61.05	12.01
CDY13688	Canola	cytosol	61.05	12.01
Solyc02g067880.1.1	Tomato	cytosol	55.79	11.91
CDY52697	Canola	cytosol	60.0	11.88
KRG93941	Soybean	cytosol	56.84	11.82
CDY36391	Canola	cytosol	60.0	11.73
CDY42388	Canola	cytosol	57.89	11.68
CDY10528	Canola	cytosol	51.58	10.65
CDY20046	Canola	cytosol	78.95	8.66
CDY54029	Canola	plastid	26.32	8.65
CDY59158	Canola	plastid	25.26	8.33
CDX67576	Canola	plastid	24.21	7.96
CDX94320	Canola	cytosol	57.89	6.32
VIT_14s0066g00270.t01	Wine grape	endoplasmic reticulum, golgi	61.05	5.64
CDY72083	Canola	cytosol	3.16	4.69
CDY07735	Canola	plastid	11.58	4.03
CDY35538	Canola	plastid	10.53	3.13
CDY70621	Canola	plastid	4.21	3.08
CDY22582	Canola	plastid	11.58	2.77
CDY59208	Canola	plastid	11.58	2.77
CDY41745	Canola	plastid	11.58	2.74
CDX84108	Canola	plastid	11.58	2.74
CDX94369	Canola	cytosol, plastid, vacuole	3.16	2.42
CDY13403	Canola	cytosol	2.11	1.44
CDX89329	Canola	cytosol	5.26	1.4
CDY07734	Canola	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:CDY07890	EnsemblPlantsGene:GSBRNA2T00125079001	Gene3D:3.40.50.2020	GO:A0A078F0D4	InterPro:PRTase-like	KEGG:00240+2.4.2.9+2.7.1.48
KEGG:00983+2.7.1.48	MetaCyc:PWY-7183	MetaCyc:PWY-7193	PANTHER:PTHR10285	PANTHER:PTHR10285:SF75	PFAM:PF14681
ProteinID:CDY07890	ProteinID:CDY07890.1	SUPFAM:SSF53271	UniParc:UPI0004EE2DB0	UniPathway:UPA00574	UniPathway:UPA00579
UniProt:A0A078F0D4	MapMan:50.2.4	:	:	:	:

Description

BnaC03g47320DBnaC03g47320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F0D4]

Coordinates

chrLK031981:-:934612..935729

Molecular Weight (calculated)

10527.8 Da

IEP (calculated)

7.505

GRAVY (calculated)

-0.066

Length

95 amino acids

Sequence
(BLAST)

1: MYTRVDFCKR LCGVSVIRSK GVPESHIIFL NVIAAPQGIH GLCKKHPMVT IVTSEIDASL TEDSRVIPGL GEFADHYFGT DNSKKYQEYP GMPIT

Best Arabidopsis Sequence Match ( AT3G27440.3 )
(BLAST)

001: MIMSQLHDQR VVLVNQDSFY HSLTKEKLNK VHEYNFDHPD AFNTEVLLSC MEKLRSGQPV NIPSYDFKIH QSIESSSPVN PGDVIILEGI LVLNDPRVRD
101: LMNMKIFVDT DADVRLSRRI QRDTVERGRN IQNVLEQYTK FVKPSFDEYI QPSMKYADII IPRGGDNDVA IDLIVQHIRT KLCQHNLCKI YSNIFIISST
201: FQIKGMHTLI RDINTTKHDF VFYADRLIRL VVEHGLGHLP FTEKQITTPT GSVYTGVDFC KRLCGVSVIR SGESMENALR ACCNGIKIGK ILIHRENNDG
301: RQLIYEKLPK DISSRHVFLL DPVLASGYSA VKAITLLLSK GVPESHIIFL NLIAAPQGIH ALCKKFPMLK IVTSEIDSSL NEDSRVIPGL GEFADRYFGT
401: NNINSKVSSL STNLKLRS

Arabidopsis Description

UKL5Uridine kinase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTY6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.