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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 4
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY54439 Canola cytosol 97.89 97.89
CDY07890 Canola cytosol 97.89 97.89
CDX97201 Canola cytosol 54.74 69.33
CDX75814 Canola endoplasmic reticulum, extracellular 35.79 47.22
CDY50103 Canola cytosol 61.05 17.63
CDY00155 Canola cytosol 78.95 16.45
AT3G27440.1 Thale cress cytosol 75.79 15.48
PGSC0003DMT400017925 Potato cytosol 55.79 14.85
CDX73515 Canola cytosol 26.32 14.45
CDY17380 Canola cytosol 61.05 12.39
CDY28618 Canola cytosol 61.05 12.39
CDX89330 Canola cytosol 61.05 12.34
CDX83666 Canola cytosol 61.05 12.01
CDY34172 Canola cytosol 61.05 12.01
CDY13688 Canola cytosol 61.05 12.01
CDY28487 Canola cytosol 61.05 12.01
Solyc02g067880.1.1 Tomato cytosol 55.79 11.91
CDY52697 Canola cytosol 60.0 11.88
KRG93941 Soybean cytosol 56.84 11.82
CDY36391 Canola cytosol 60.0 11.73
CDY42388 Canola cytosol 57.89 11.68
CDY10528 Canola cytosol 51.58 10.65
CDY20046 Canola cytosol 78.95 8.66
CDY54029 Canola plastid 26.32 8.65
CDY59158 Canola plastid 25.26 8.33
CDX67576 Canola plastid 24.21 7.96
CDX94320 Canola cytosol 57.89 6.32
VIT_14s0066g00270.t01 Wine grape endoplasmic reticulum, golgi 61.05 5.64
CDY72083 Canola cytosol 3.16 4.69
CDY07735 Canola plastid 11.58 4.03
CDY70621 Canola plastid 4.21 3.08
CDY35538 Canola plastid 9.47 2.82
CDY22582 Canola plastid 10.53 2.52
CDY59208 Canola plastid 10.53 2.52
CDY41745 Canola plastid 10.53 2.49
CDX84108 Canola plastid 10.53 2.49
CDX94369 Canola cytosol, plastid, vacuole 3.16 2.42
CDY13403 Canola cytosol 2.11 1.44
CDX89329 Canola cytosol 5.26 1.4
CDY07734 Canola plastid 0.0 0.0
Protein Annotations
EnsemblPlants:CDY70546EnsemblPlantsGene:GSBRNA2T00004181001Gene3D:3.40.50.2020GO:A0A078JYH3InterPro:PRTase-likeKEGG:00240+2.4.2.9+2.7.1.48
KEGG:00983+2.7.1.48MetaCyc:PWY-7183MetaCyc:PWY-7193PANTHER:PTHR10285PANTHER:PTHR10285:SF75PFAM:PF14681
ProteinID:CDY70546ProteinID:CDY70546.1SUPFAM:SSF53271UniParc:UPI0004EEBBD6UniPathway:UPA00574UniPathway:UPA00579
UniProt:A0A078JYH3MapMan:50.2.4::::
Description
BnaC05g49960DBnaC05g49960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JYH3]
Coordinates
chrLK042447:-:1467..2579
Molecular Weight (calculated)
10586.9 Da
IEP (calculated)
8.077
GRAVY (calculated)
-0.124
Length
95 amino acids
Sequence
(BLAST)
1: MYTRVDFCKR LCGVSVIRSK GVPESHIIFL NVIAAPQGIH GLCKKHPMVK IMTSEIDASL TEDSRVIPGL GEFADHYFGT DNSKKYQEYP GMPIT
Best Arabidopsis Sequence Match ( AT3G27440.3 )
(BLAST)
001: MIMSQLHDQR VVLVNQDSFY HSLTKEKLNK VHEYNFDHPD AFNTEVLLSC MEKLRSGQPV NIPSYDFKIH QSIESSSPVN PGDVIILEGI LVLNDPRVRD
101: LMNMKIFVDT DADVRLSRRI QRDTVERGRN IQNVLEQYTK FVKPSFDEYI QPSMKYADII IPRGGDNDVA IDLIVQHIRT KLCQHNLCKI YSNIFIISST
201: FQIKGMHTLI RDINTTKHDF VFYADRLIRL VVEHGLGHLP FTEKQITTPT GSVYTGVDFC KRLCGVSVIR SGESMENALR ACCNGIKIGK ILIHRENNDG
301: RQLIYEKLPK DISSRHVFLL DPVLASGYSA VKAITLLLSK GVPESHIIFL NLIAAPQGIH ALCKKFPMLK IVTSEIDSSL NEDSRVIPGL GEFADRYFGT
401: NNINSKVSSL STNLKLRS
Arabidopsis Description
UKL5Uridine kinase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTY6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.