Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400022940 | Potato | cytosol | 71.54 | 71.54 |
| CDX73515 | Canola | cytosol | 68.46 | 51.45 |
| VIT_08s0007g01100.t01 | Wine grape | cytosol | 80.77 | 46.26 |
| CDY54029 | Canola | plastid | 96.92 | 43.6 |
| Bra007034.1-P | Field mustard | plastid | 96.92 | 43.3 |
| CDY59158 | Canola | plastid | 93.85 | 42.36 |
| CDX67576 | Canola | plastid | 93.08 | 41.87 |
| AT3G53900.2 | Thale cress | plastid | 90.77 | 39.86 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane, plastid | 76.15 | 36.8 |
| KRH75660 | Soybean | plastid | 79.23 | 36.01 |
| Solyc09g011300.2.1 | Tomato | plastid | 77.69 | 35.31 |
| Zm00001d024109_P001 | Maize | cytosol | 59.23 | 33.77 |
| KXG25691 | Sorghum | cytosol | 63.85 | 33.6 |
| TraesCS1A01G281700.1 | Wheat | plastid | 71.54 | 31.53 |
| TraesCS1B01G290800.1 | Wheat | plastid | 71.54 | 31.53 |
| TraesCS1D01G280900.1 | Wheat | plastid | 71.54 | 31.53 |
| Os05t0455700-02 | Rice | plastid | 72.31 | 31.23 |
| HORVU1Hr1G072750.2 | Barley | plasma membrane | 72.31 | 29.56 |
| KRH65897 | Soybean | plastid | 79.23 | 28.3 |
| CDX94369 | Canola | cytosol, plastid, vacuole | 25.38 | 26.61 |
| CDY07735 | Canola | plastid | 45.38 | 21.61 |
| CDY50103 | Canola | cytosol | 21.54 | 8.51 |
| CDY00155 | Canola | cytosol | 23.08 | 6.58 |
| CDY34172 | Canola | cytosol | 23.85 | 6.42 |
| CDX83666 | Canola | cytosol | 23.85 | 6.42 |
| CDY13688 | Canola | cytosol | 23.85 | 6.42 |
| CDY28487 | Canola | cytosol | 23.85 | 6.42 |
| CDY28618 | Canola | cytosol | 23.08 | 6.41 |
| CDY17380 | Canola | cytosol | 23.08 | 6.41 |
| CDX89330 | Canola | cytosol | 23.08 | 6.38 |
| CDY52697 | Canola | cytosol | 23.08 | 6.25 |
| CDY36391 | Canola | cytosol | 23.08 | 6.17 |
| CDY42388 | Canola | cytosol | 21.54 | 5.94 |
| CDY10528 | Canola | cytosol | 19.23 | 5.43 |
| CDY59208 | Canola | plastid | 14.62 | 4.79 |
| CDY22582 | Canola | plastid | 14.62 | 4.79 |
| CDY41745 | Canola | plastid | 13.85 | 4.49 |
| CDX84108 | Canola | plastid | 13.85 | 4.49 |
| CDY13403 | Canola | cytosol | 4.62 | 4.32 |
| CDY70546 | Canola | cytosol | 3.08 | 4.21 |
| CDY54439 | Canola | cytosol | 3.08 | 4.21 |
| CDY07890 | Canola | cytosol | 3.08 | 4.21 |
| CDY20046 | Canola | cytosol | 23.08 | 3.46 |
| CDX94320 | Canola | cytosol | 23.08 | 3.45 |
| CDY07734 | Canola | plastid | 1.54 | 2.56 |
| CDX97201 | Canola | cytosol | 0.77 | 1.33 |
| CDY35538 | Canola | plastid | 2.31 | 0.94 |
| CDX89329 | Canola | cytosol | 0.0 | 0.0 |
| CDY72083 | Canola | cytosol | 0.0 | 0.0 |
| CDX75814 | Canola | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY70621 | EnsemblPlantsGene:GSBRNA2T00004846001 | Gene3D:3.40.50.2020 | InterPro:PRTase-like | PANTHER:PTHR10285 | PANTHER:PTHR10285:SF46 |
| PFAM:PF14681 | ProteinID:CDY70621 | ProteinID:CDY70621.1 | SUPFAM:SSF53271 | UniParc:UPI0004EF38C3 | UniProt:A0A078JYL6 |
| MapMan:6.2.2.2 | : | : | : | : | : |
Description
BnaC08g48830DBnaC08g48830D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JYL6]
Coordinates
chrLK042719:-:47..944
Molecular Weight (calculated)
14538.7 Da
IEP (calculated)
5.588
GRAVY (calculated)
0.113
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFQVFVPPH PLIKHWISVL RNDQTPSPIF RSAIAELGRL LMYEASREWL PTVVGEIMSP MGAASVEFID PREPIAVVPI LRAGLALAEH ASTVLPANKI
101: YHLGISRDEE TLLPSVYLNK LPDEFPENSR
101: YHLGISRDEE TLLPSVYLNK LPDEFPENSR
001: MACSIGNAFR CSSDTLRFAP RQQCSSRLNP NPSSFLSFNS SPILAQNLGA SSSSLSRRTI RARTKMAASE ASINGSNRML VFVPPHPLIK HWISVLRNEQ
101: TPCPVFRNAI AELGRLLMYE ASREWLPTVV GEIMSPMGPA SVEFIDPREP IAVVPILRAG LALAEHASSV LPANKIYHLG VSRDEKTLLP SVYLNKLPDE
201: FPKNSRVFLV DPVLATGGTI MAAMDLLKER GLSVQQIKVI CAIAAPPALS KLNEKFPGLH VYAGIIDPEV NEKGYIIPGL GDAGDRSFGT ETHWVK
101: TPCPVFRNAI AELGRLLMYE ASREWLPTVV GEIMSPMGPA SVEFIDPREP IAVVPILRAG LALAEHASSV LPANKIYHLG VSRDEKTLLP SVYLNKLPDE
201: FPKNSRVFLV DPVLATGGTI MAAMDLLKER GLSVQQIKVI CAIAAPPALS KLNEKFPGLH VYAGIIDPEV NEKGYIIPGL GDAGDRSFGT ETHWVK
Arabidopsis Description
UPPUracil phosphoribosyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M336]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.