Factsheet for VIT_08s0007g01100.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73515	Canola	cytosol	63.44	83.24
CDY70621	Canola	plastid	46.26	80.77
PGSC0003DMT400022940	Potato	cytosol	45.81	80.0
Bra003159.1-P	Field mustard	plastid	77.09	77.78
KRH75660	Soybean	plastid	85.46	67.83
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, plastid	77.53	65.43
Solyc09g011300.2.1	Tomato	plastid	79.74	63.29
CDY54029	Canola	plastid	79.3	62.28
Zm00001d024109_P001	Maize	cytosol	62.56	62.28
Bra007034.1-P	Field mustard	plastid	79.3	61.86
CDX67576	Canola	plastid	77.97	61.25
CDY59158	Canola	plastid	77.53	61.11
AT3G53900.2	Thale cress	plastid	77.53	59.46
KXG25691	Sorghum	cytosol	63.88	58.7
Os05t0455700-02	Rice	plastid	76.65	57.81
TraesCS1D01G280900.1	Wheat	plastid	74.45	57.29
TraesCS1A01G281700.1	Wheat	plastid	74.45	57.29
TraesCS1B01G290800.1	Wheat	plastid	74.01	56.95
KRH65897	Soybean	plastid	85.9	53.57
HORVU1Hr1G072750.2	Barley	plasma membrane	74.45	53.14
VIT_17s0000g01600.t01	Wine grape	cytosol	23.35	23.35
VIT_17s0000g01620.t01	Wine grape	cytosol	32.16	15.47
VIT_14s0171g00090.t01	Wine grape	cytosol	30.4	14.32
VIT_19s0015g01730.t01	Wine grape	cytosol	26.87	12.73
VIT_02s0109g00080.t01	Wine grape	plastid	13.66	7.6
VIT_16s0039g02140.t01	Wine grape	plastid	12.33	6.86
VIT_14s0066g00270.t01	Wine grape	endoplasmic reticulum, golgi	26.43	5.84

Protein Annotations

KEGG:00240+2.4.2.9	EntrezGene:100261300	wikigene:100261300	Gene3D:3.40.50.2020	MapMan:6.2.2.2	ProteinID:CCB55555
ProteinID:CCB55555.1	UniProt:F6HL38	EMBL:FN595991	GO:GO:0003674	GO:GO:0003824	GO:GO:0004845
GO:GO:0004849	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0006139	GO:GO:0006206	GO:GO:0006222	GO:GO:0006223	GO:GO:0006950	GO:GO:0007154
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009507	GO:GO:0009536
GO:GO:0009570	GO:GO:0009605	GO:GO:0009987	GO:GO:0009991	GO:GO:0016020	GO:GO:0016021
GO:GO:0016036	GO:GO:0016301	GO:GO:0016740	GO:GO:0032502	GO:GO:0043097	EntrezGene:LOC100261300
wikigene:LOC100261300	PFAM:PF14681	InterPro:PRTase-like	InterPro:PRibTrfase_dom	PANTHER:PTHR10285	PANTHER:PTHR10285:SF46
SUPFAM:SSF53271	TIGRFAMs:TIGR01091	UniParc:UPI00015C939E	InterPro:Ura_phspho_trans	ArrayExpress:VIT_08s0007g01100	EnsemblPlantsGene:VIT_08s0007g01100
EnsemblPlants:VIT_08s0007g01100.t01	unigene:Vvi.25346	RefSeq:XP_002273489	RefSeq:XP_002273489.1	:	:

Description

No Description!

Coordinates

chr8:+:15204297..15222903

Molecular Weight (calculated)

24856.4 Da

IEP (calculated)

6.525

GRAVY (calculated)

0.023

Length

227 amino acids

Sequence
(BLAST)

001: MSQTTSDNRS LPDEKMLVFV PPHPLIKHWV SVLRNEQTPC PIFRNAMAEL GRLLMYEASR DWLPTVKGEI QSPMGVASVE FIDPREPVAV VPILRAGLAL
101: MEYASSILPA TKTYHLGISR DEETLQPTIY LNKLPDKFPE GSRVFLVDPM LATGGTIVAA LDLVKERGIN IKQIKVISAV AAPPALQKLS EKFPGLHIYT
201: GIIDPTVNDK GFIIPGLGDA GDRSFGT

Best Arabidopsis Sequence Match ( AT3G53900.2 )
(BLAST)

001: MACSIGNAFR CSSDTLRFAP RQQCSSRLNP NPSSFLSFNS SPILAQNLGA SSSSLSRRTI RARTKMAASE ASINGSNRML VFVPPHPLIK HWISVLRNEQ
101: TPCPVFRNAI AELGRLLMYE ASREWLPTVV GEIMSPMGPA SVEFIDPREP IAVVPILRAG LALAEHASSV LPANKIYHLG VSRDEKTLLP SVYLNKLPDE
201: FPKNSRVFLV DPVLATGGTI MAAMDLLKER GLSVQQIKVI CAIAAPPALS KLNEKFPGLH VYAGIIDPEV NEKGYIIPGL GDAGDRSFGT ETHWVK

Arabidopsis Description

UPPUracil phosphoribosyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M336]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.