Factsheet for Bra003159.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
nucleus 1
mitochondrion 1
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59158	Canola	plastid	99.56	77.78
CDX67576	Canola	plastid	99.11	77.16
VIT_08s0007g01100.t01	Wine grape	cytosol	77.78	77.09
PGSC0003DMT400022940	Potato	cytosol	44.0	76.15
Bra007034.1-P	Field mustard	plastid	96.89	74.91
AT3G53900.2	Thale cress	plastid	94.22	71.62
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, plastid	73.33	61.34
KRH75660	Soybean	plastid	77.33	60.84
Solyc09g011300.2.1	Tomato	plastid	76.89	60.49
Zm00001d024109_P001	Maize	cytosol	59.56	58.77
KXG25691	Sorghum	cytosol	62.22	56.68
TraesCS1D01G280900.1	Wheat	plastid	68.0	51.86
TraesCS1A01G281700.1	Wheat	plastid	68.0	51.86
TraesCS1B01G290800.1	Wheat	plastid	67.56	51.53
Os05t0455700-02	Rice	plastid	68.89	51.49
KRH65897	Soybean	plastid	77.78	48.08
HORVU1Hr1G072750.2	Barley	plasma membrane	67.56	47.8
Bra023238.1-P	Field mustard	mitochondrion	34.67	23.15
Bra012086.1-P	Field mustard	mitochondrion	21.33	22.64
Bra035516.1-P	Field mustard	cytosol	11.56	13.61
Bra032986.1-P	Field mustard	cytosol	27.11	12.63
Bra025256.1-P	Field mustard	cytosol	27.11	12.63
Bra002854.1-P	Field mustard	cytosol	26.22	12.61
Bra026427.1-P	Field mustard	cytosol	26.22	12.55
Bra025537.1-P	Field mustard	cytosol	26.67	12.5
Bra030832.1-P	Field mustard	cytosol	22.22	11.11
Bra039077.1-P	Field mustard	mitochondrion	28.0	7.99
Bra023235.1-P	Field mustard	plastid	13.33	7.56
Bra033861.1-P	Field mustard	plastid	12.89	7.34
Bra026426.1-P	Field mustard	cytosol	1.78	1.12

Protein Annotations

KEGG:00240+2.4.2.9	Gene3D:3.40.50.2020	MapMan:6.2.2.2	EnsemblPlantsGene:Bra003159	EnsemblPlants:Bra003159.1	EnsemblPlants:Bra003159.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004845	GO:GO:0006139	GO:GO:0006223	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009116	GO:GO:0009987	GO:GO:0016740	UniProt:M4CG26
PFAM:PF14681	InterPro:PRTase-like	InterPro:PRibTrfase_dom	PANTHER:PTHR10285	PANTHER:PTHR10285:SF46	SUPFAM:SSF53271
TIGRFAMs:TIGR01091	UniParc:UPI00025413C5	InterPro:Ura_phspho_trans	:	:	:

Description

AT3G53900 (E=5e-122) | uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative

Coordinates

chrA07:-:11619162..11620934

Molecular Weight (calculated)

24373.9 Da

IEP (calculated)

6.679

GRAVY (calculated)

0.156

Length

225 amino acids

Sequence
(BLAST)

001: MAASEGSING SNRMLVFVPP HPLIKHWISV LRNDQTPCPI FRNAIGELGR LLMYEASREW LPTVVGEIMS PMGAASVEFI DPREPIAVVP ILRAGLALAE
101: HASTVLPANK IYHLGISRDE KTLLPSVYLN KLPDEFPKNS RVFLVDPMLA TGGTIIAAMD MLKERGLSVQ QIKVICAVAA PPALSKLNEK YPGLHVYAGI
201: IDPEVNEKGF IIPGLGDAGD RSFGT

Best Arabidopsis Sequence Match ( AT3G53900.2 )
(BLAST)

001: MACSIGNAFR CSSDTLRFAP RQQCSSRLNP NPSSFLSFNS SPILAQNLGA SSSSLSRRTI RARTKMAASE ASINGSNRML VFVPPHPLIK HWISVLRNEQ
101: TPCPVFRNAI AELGRLLMYE ASREWLPTVV GEIMSPMGPA SVEFIDPREP IAVVPILRAG LALAEHASSV LPANKIYHLG VSRDEKTLLP SVYLNKLPDE
201: FPKNSRVFLV DPVLATGGTI MAAMDLLKER GLSVQQIKVI CAIAAPPALS KLNEKFPGLH VYAGIIDPEV NEKGYIIPGL GDAGDRSFGT ETHWVK

Arabidopsis Description

UPPUracil phosphoribosyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M336]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.