Factsheet for Bra023235.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra027469.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32060.1	Bra027469.1-P	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59208	Canola	plastid	100.0	100.0
Bra033861.1-P	Field mustard	plastid	97.48	97.97
Bra035516.1-P	Field mustard	cytosol	46.35	96.34
AT1G32060.1	Thale cress	plastid	94.21	94.68
KRH74288	Soybean	nucleus, plastid	86.9	84.77
KRH39632	Soybean	nucleus, plastid	86.9	84.77
VIT_02s0109g00080.t01	Wine grape	plastid	84.63	82.35
EES12777	Sorghum	plastid	72.54	74.42
Os04t0596900-00	Rice	extracellular, plasma membrane	75.31	74.38
GSMUA_Achr1P23890_001	Banana	plastid	72.8	71.01
GSMUA_Achr2P09720_001	Banana	cytosol	17.88	70.3
Zm00001d002454_P002	Maize	plastid	68.51	65.23
Bra025537.1-P	Field mustard	cytosol	19.14	15.83
Bra032986.1-P	Field mustard	cytosol	19.14	15.73
Bra002854.1-P	Field mustard	cytosol	17.88	15.17
Bra025256.1-P	Field mustard	cytosol	18.39	15.11
Bra026427.1-P	Field mustard	cytosol	17.63	14.89
Bra030832.1-P	Field mustard	cytosol	16.62	14.67
Bra003159.1-P	Field mustard	plastid	7.56	13.33
Bra007034.1-P	Field mustard	plastid	7.81	10.65
Bra039077.1-P	Field mustard	mitochondrion	18.14	9.14
Bra012086.1-P	Field mustard	mitochondrion	4.53	8.49
Bra023238.1-P	Field mustard	mitochondrion	6.05	7.12
Bra026426.1-P	Field mustard	cytosol	1.01	1.12

Protein Annotations

KEGG:00710+2.7.1.19	MapMan:1.2.11	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra023235	EnsemblPlants:Bra023235.1	EnsemblPlants:Bra023235.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0008974	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	UniProt:M4E384	InterPro:P-loop_NTPase	PFAM:PF00485	PRINTS:PR00478	InterPro:PRK
InterPro:PRK/URK	ScanProsite:PS00567	PANTHER:PTHR10285	PANTHER:PTHR10285:SF120	SUPFAM:SSF52540	UniParc:UPI000254235A
SEG:seg	:	:	:	:	:

Description

AT1G32060 (E=3e-210) PRK | PRK (PHOSPHORIBULOKINASE); ATP binding / phosphoribulokinase/ protein binding

Coordinates

chrA09:-:20417598..20419305

Molecular Weight (calculated)

44417.9 Da

IEP (calculated)

5.487

GRAVY (calculated)

-0.277

Length

397 amino acids

Sequence
(BLAST)

001: MAVSTIYSTQ ALNSTHFLTS SPSSSSKQVF FYRRQTNRRF NTIITCAAQQ TVVIGLAADS GCGKSTFMRR LTSVFGGAAE PPKGGNPDSN TLISDMTTVI
101: CLDDYHSLDR TGRKEKGVTA LDPRANDFDL MYEQVKALKS GIAVEKPIYN HVTGLLDAPE LIQPPKILVI EGLHPMFDER VRELLDFSIY LDISNEVKFA
201: WKIQRDMAER GHSLESIKAS IEARKPDFDA FIDPQKQYAD AVIEVLPTQL IPDDNEGKVL RVRLIMKEGV KYFSPVYLFD EGSTISWIPC GRKLTCSYPG
301: IKFNYQPDSY FDNEVSVVEM DGQFDRLDEL IYVESHLSNL STKFYGEVTQ QMLKHADFPG SNNGTGLFQT IVGLKIRDLY EQLIANKANA PTEAAKA

Best Arabidopsis Sequence Match ( AT1G32060.1 )
(BLAST)

001: MAVSTIYSTQ ALNSTHFLTS SSSSKQVFLY RRQPQTNRRF NTLITCAQET IVIGLAADSG CGKSTFMRRL TSVFGGAAKP PKGGNPDSNT LISDTTTVIC
101: LDDYHSLDRY GRKEQKVTAL DPRANDFDLM YEQVKALKNG IAVEKPIYNH VTGLLDPPEL IQPPKILVIE GLHPMFDERV RDLLDFSIYL DISNEVKFAW
201: KIQRDMAERG HSLESIKASI EARKPDFDAF IDPQKQYADA VIEVLPTTLI PDDNEGKVLR VRLIMKEGVK YFSPVYLFDE GSTISWIPCG RKLTCSYPGI
301: KFNYEPDSYF DHEVSVLEMD GQFDRLDELI YVESHLSNLS TKFYGEVTQQ MLKHADFPGS NNGTGLFQTI VGLKIRDLYE QLIANKATAR AEAKA

Arabidopsis Description

PRKPhosphoribulokinase [Source:UniProtKB/TrEMBL;Acc:A0A178WLP9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.