Factsheet for Os04t0596900-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

plastid 7
mitochondrion 3

Predictors

GFP

MS/MS

Papers

extracellular: 23159799
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 23159799 doi

SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang

Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0698000-01	Rice	extracellular, plastid	76.12	75.93
AT1G32060.1	Thale cress	plastid	74.38	75.7
Bra033861.1-P	Field mustard	plastid	74.38	75.7
Solyc08g076220.2.1	Tomato	plastid	75.12	75.5
Bra023235.1-P	Field mustard	plastid	74.38	75.31
PGSC0003DMT400024090	Potato	cytosol, extracellular, plastid	75.87	75.31
EES12777	Sorghum	plastid	72.39	75.19
VIT_02s0109g00080.t01	Wine grape	plastid	74.63	73.53
KRH39632	Soybean	nucleus, plastid	73.63	72.73
KRH74288	Soybean	nucleus, plastid	73.38	72.48
GSMUA_Achr1P23890_001	Banana	plastid	68.41	67.57
CDY35538	Canola	plastid	52.99	66.77
Zm00001d002454_P002	Maize	plastid	67.91	65.47
GSMUA_Achr2P09720_001	Banana	cytosol	16.42	65.35
Os11t0265000-01	Rice	cytosol	18.91	15.48
Os08t0530000-01	Rice	plasma membrane	18.66	15.27
Os09t0505800-01	Rice	plasma membrane	18.16	14.72
Os05t0455700-02	Rice	plastid	7.21	9.63

Protein Annotations

KEGG:00710+2.7.1.19	MapMan:1.2.11	Gene3D:3.40.50.300	EntrezGene:9268984	ProteinID:BAH92803.1	ProteinID:BAS90795.1
UniProt:C7J1V7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004849	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005829	GO:GO:0005975	GO:GO:0006139	GO:GO:0006206	GO:GO:0006222	GO:GO:0008150
GO:GO:0008152	GO:GO:0008974	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0043097	EnsemblPlantsGene:Os04g0596900	EnsemblPlants:Os04t0596900-00
InterPro:P-loop_NTPase	PFAM:PF00485	PRINTS:PR00478	InterPro:PRK	InterPro:PRK/URK	ScanProsite:PS00567
PANTHER:PTHR10285	PANTHER:PTHR10285:SF120	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000021C9FF	RefSeq:XP_015635122.1
SEG:seg	:	:	:	:	:

Description

Phosphoribulokinase/uridine kinase family protein. (Os04t0596900-00)

Coordinates

chr4:-:30107310..30108889

Molecular Weight (calculated)

43719.2 Da

IEP (calculated)

6.720

GRAVY (calculated)

-0.107

Length

402 amino acids

Sequence
(BLAST)

001: MAARSFSSAS TTTILLRSGR WRRTMRAAAF PFRVSCSAAA AAAAGGTVVI GLAADSGCGK TTFVRRLTSV LGAGTAAAAA PPWGGNPGSN TLLGDAATVI
101: CLDDYHSLDR AGRKERGVTA LDPRANDFDL MYRQLKAIKE GRAVAKPIYN HATGLLDPPE LITPPKILVV EGLHPMYDER VRGLLDFSIY LDISSDIKFA
201: WKIQRDMAER GHSLESIKAS IEARKPDFDA YIDPQKQYAD AVIEVLPTRL IAAADDDGDE GKVLRVKLIM KEGVEHFAPA YLFDEGSTIS WIPCGRKLSC
301: SYPGIKFSYF PDTYFGHEVS VLEMDGKFDK LDELIYVESH LSNLSTKYYG EVTQQMLKHA DFPGSNNGTG LFQTIVGLKI RDLYEQVVAE RAASPPALAA
401: VA

Best Arabidopsis Sequence Match ( AT1G32060.1 )
(BLAST)

001: MAVSTIYSTQ ALNSTHFLTS SSSSKQVFLY RRQPQTNRRF NTLITCAQET IVIGLAADSG CGKSTFMRRL TSVFGGAAKP PKGGNPDSNT LISDTTTVIC
101: LDDYHSLDRY GRKEQKVTAL DPRANDFDLM YEQVKALKNG IAVEKPIYNH VTGLLDPPEL IQPPKILVIE GLHPMFDERV RDLLDFSIYL DISNEVKFAW
201: KIQRDMAERG HSLESIKASI EARKPDFDAF IDPQKQYADA VIEVLPTTLI PDDNEGKVLR VRLIMKEGVK YFSPVYLFDE GSTISWIPCG RKLTCSYPGI
301: KFNYEPDSYF DHEVSVLEMD GQFDRLDELI YVESHLSNLS TKFYGEVTQQ MLKHADFPGS NNGTGLFQTI VGLKIRDLYE QLIANKATAR AEAKA

Arabidopsis Description

PRKPhosphoribulokinase [Source:UniProtKB/TrEMBL;Acc:A0A178WLP9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.