Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY59208 Canola plastid 87.46 70.28
CDY22582 Canola plastid 87.46 70.28
CDY41745 Canola plastid 87.46 69.58
CDX84108 Canola plastid 87.46 69.58
KRH74288 Soybean nucleus, plastid 79.31 62.16
KRH39632 Soybean nucleus, plastid 79.31 62.16
PGSC0003DMT400024090 Potato cytosol, extracellular, plastid 77.12 60.74
Solyc08g076220.2.1 Tomato plastid 75.86 60.5
VIT_02s0109g00080.t01 Wine grape plastid 75.55 59.07
EES12777 Sorghum plastid 64.58 53.23
Os04t0596900-00 Rice extracellular, plasma membrane 66.77 52.99
Zm00001d002454_P002 Maize plastid 64.89 49.64
CDY13403 Canola cytosol 5.33 12.23
CDX97201 Canola cytosol 2.82 12.0
CDX75814 Canola endoplasmic reticulum, extracellular 2.51 11.11
CDY34172 Canola cytosol 16.61 10.97
CDY00155 Canola cytosol 15.67 10.96
CDY17380 Canola cytosol 15.99 10.9
CDY10528 Canola cytosol 15.67 10.87
CDY28487 Canola cytosol 16.3 10.77
CDY28618 Canola cytosol 15.67 10.68
CDY42388 Canola cytosol 15.67 10.62
CDY07890 Canola cytosol 3.13 10.53
CDY52697 Canola cytosol 15.67 10.42
CDX83666 Canola cytosol 15.67 10.35
CDY13688 Canola cytosol 15.67 10.35
CDX89330 Canola cytosol 15.05 10.21
CDY36391 Canola cytosol 15.36 10.08
CDY54439 Canola cytosol 2.82 9.47
CDY70546 Canola cytosol 2.82 9.47
CDY50103 Canola cytosol 8.46 8.21
CDY72083 Canola cytosol 1.57 7.81
CDY07734 Canola plastid 1.88 7.69
CDX94369 Canola cytosol, plastid, vacuole 2.82 7.26
CDY20046 Canola cytosol 15.99 5.89
CDX94320 Canola cytosol 14.73 5.4
CDX73515 Canola cytosol 2.82 5.2
CDY54029 Canola plastid 4.7 5.19
CDX67576 Canola plastid 4.7 5.19
CDY59158 Canola plastid 4.39 4.86
CDY07735 Canola plastid 3.13 3.66
CDY70621 Canola plastid 0.94 2.31
CDX89329 Canola cytosol 1.25 1.12
Protein Annotations
KEGG:00710+2.7.1.19Gene3D:3.40.50.300MapMan:50.2.7GO:A0A078HFG0UniProt:A0A078HFG0EnsemblPlants:CDY35538
ProteinID:CDY35538ProteinID:CDY35538.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0008974
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740
EnsemblPlantsGene:GSBRNA2T00058593001InterPro:P-loop_NTPasePFAM:PF00485PRINTS:PR00478InterPro:PRKInterPro:PRK/URK
PANTHER:PTHR10285PANTHER:PTHR10285:SF120MetaCyc:PWY-5723SUPFAM:SSF52540TMHMM:TMhelixUniPathway:UPA00116
UniParc:UPI0004EDF465SEG:seg::::
Description
BnaA05g16480DBnaA05g16480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HFG0]
Coordinates
chrLK032354:+:112573..114456
Molecular Weight (calculated)
35862.1 Da
IEP (calculated)
6.399
GRAVY (calculated)
0.019
Length
319 amino acids
Sequence
(BLAST)
001: MAVSTIYSTQ ALNSTHFFTS SSSKQVFFYR RQTNRRFNTI ITCAAQQTVV IGLAADSGCG KSTFMRRLTS VFGGAAEPPK GGNPDSNTLI SDMTTVICLD
101: DYHSLDRTGR KEKGVTALDP RANDFDLMYE QVKALKSSIA VEKPIYNHVT GLLDAPELIQ PPKILVIEGL HPMFDERVRD LLDFSIYLDI SNEVKFAWKI
201: QVCFFIYFIF VHWLILQNEF RFFLALGLSI LFSLFQVSVV EMDGQFDRLD ELIYVESHLS NLSTKFYGEV TQQMLKHADF PGSNNGTGLF QTIVGLKIRD
301: LYEQLIANKA TAPAEAAKA
Best Arabidopsis Sequence Match ( AT1G32060.1 )
(BLAST)
001: MAVSTIYSTQ ALNSTHFLTS SSSSKQVFLY RRQPQTNRRF NTLITCAQET IVIGLAADSG CGKSTFMRRL TSVFGGAAKP PKGGNPDSNT LISDTTTVIC
101: LDDYHSLDRY GRKEQKVTAL DPRANDFDLM YEQVKALKNG IAVEKPIYNH VTGLLDPPEL IQPPKILVIE GLHPMFDERV RDLLDFSIYL DISNEVKFAW
201: KIQRDMAERG HSLESIKASI EARKPDFDAF IDPQKQYADA VIEVLPTTLI PDDNEGKVLR VRLIMKEGVK YFSPVYLFDE GSTISWIPCG RKLTCSYPGI
301: KFNYEPDSYF DHEVSVLEMD GQFDRLDELI YVESHLSNLS TKFYGEVTQQ MLKHADFPGS NNGTGLFQTI VGLKIRDLYE QLIANKATAR AEAKA
Arabidopsis Description
PRKPhosphoribulokinase [Source:UniProtKB/TrEMBL;Acc:A0A178WLP9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.