Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94369 | Canola | cytosol, plastid, vacuole | 96.88 | 50.0 |
| Bra012086.1-P | Field mustard | mitochondrion | 87.5 | 26.42 |
| CDY07735 | Canola | plastid | 87.5 | 20.51 |
| Bra023238.1-P | Field mustard | mitochondrion | 87.5 | 16.62 |
| CDX73515 | Canola | cytosol | 15.62 | 5.78 |
| CDX75814 | Canola | endoplasmic reticulum, extracellular | 4.69 | 4.17 |
| TraesCS1D01G280900.1 | Wheat | plastid | 15.62 | 3.39 |
| TraesCS1B01G290800.1 | Wheat | plastid | 15.62 | 3.39 |
| TraesCS1A01G281700.1 | Wheat | plastid | 15.62 | 3.39 |
| CDY70546 | Canola | cytosol | 4.69 | 3.16 |
| CDY07890 | Canola | cytosol | 4.69 | 3.16 |
| CDY54439 | Canola | cytosol | 4.69 | 3.16 |
| HORVU1Hr1G072750.2 | Barley | plasma membrane | 15.62 | 3.14 |
| CDY59158 | Canola | plastid | 14.06 | 3.12 |
| CDX67576 | Canola | plastid | 14.06 | 3.11 |
| CDY54029 | Canola | plastid | 14.06 | 3.11 |
| Os05t0455700-02 | Rice | plastid | 14.06 | 2.99 |
| CDY00155 | Canola | cytosol | 12.5 | 1.75 |
| CDY35538 | Canola | plastid | 7.81 | 1.57 |
| CDY50103 | Canola | cytosol | 7.81 | 1.52 |
| CDX97201 | Canola | cytosol | 1.56 | 1.33 |
| CDY22582 | Canola | plastid | 7.81 | 1.26 |
| CDY59208 | Canola | plastid | 7.81 | 1.26 |
| CDX84108 | Canola | plastid | 7.81 | 1.25 |
| CDY41745 | Canola | plastid | 7.81 | 1.25 |
| CDY17380 | Canola | cytosol | 7.81 | 1.07 |
| CDY28618 | Canola | cytosol | 7.81 | 1.07 |
| CDY52697 | Canola | cytosol | 7.81 | 1.04 |
| CDX83666 | Canola | cytosol | 7.81 | 1.04 |
| CDY13688 | Canola | cytosol | 7.81 | 1.04 |
| CDY36391 | Canola | cytosol | 7.81 | 1.03 |
| CDY20046 | Canola | cytosol | 12.5 | 0.92 |
| CDY10528 | Canola | cytosol | 6.25 | 0.87 |
| CDX89330 | Canola | cytosol | 6.25 | 0.85 |
| CDY42388 | Canola | cytosol | 6.25 | 0.85 |
| CDY34172 | Canola | cytosol | 6.25 | 0.83 |
| CDY28487 | Canola | cytosol | 6.25 | 0.83 |
| CDX94320 | Canola | cytosol | 6.25 | 0.46 |
| CDX89329 | Canola | cytosol | 1.56 | 0.28 |
| CDY13403 | Canola | cytosol | 0.0 | 0.0 |
| CDY70621 | Canola | plastid | 0.0 | 0.0 |
| CDY07734 | Canola | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY72083 | EnsemblPlantsGene:GSBRNA2T00023556001 | ProteinID:CDY72083 | ProteinID:CDY72083.1 | UniParc:UPI0004EE4339 | UniProt:A0A078JWQ0 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaCnng75890DBnaCnng75890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JWQ0]
Coordinates
chrLK048845:-:826..2148
Molecular Weight (calculated)
7006.5 Da
IEP (calculated)
9.164
GRAVY (calculated)
-0.206
Length
64 amino acids
Sequence
(BLAST)
(BLAST)
1: MHLLAVAGAT VVSSSFGKDE KMAKSEVAVA TTLADALYMK DDEVIAAKRE HLALRRRDSQ SMRQ
001: MEKPVFAPWR SDQVFRPPET PLEPMEFLSR SWSVSAHEVS KALTPSQQLL SKASIENTTV ILEEPIAAGE TETEDNSFVS GNPFSFACSE TSQMVMDRIL
101: SQSQEVSPRT SGRLSHSSGP LNGSLTDSPP ISPHQVDDIK QFCRSNNNFN SQYRSTGTTP GPITATTTQS KTVGRWLKDR REKKKEEMRA HNAQIHAAVS
201: VAGVAAAVAA IAAATAASSS AGKDENMAKT DMAVASAATL VAAQCVEAAE VMGAERDHLA SVVSSAVNVR SAGDIMTLTA GAATALRGVA TLKARAMKEV
301: WHIASVIPMD KGINLGGCSN VNGNGSYVSS SSSHSGEFLV EDNFLGHCNR EWLARGGQLL KRTRKGDLHW KIVSVYINRL NQVILKMKSR HVGGTFTKKN
401: KSKRNSYPYY AYT
101: SQSQEVSPRT SGRLSHSSGP LNGSLTDSPP ISPHQVDDIK QFCRSNNNFN SQYRSTGTTP GPITATTTQS KTVGRWLKDR REKKKEEMRA HNAQIHAAVS
201: VAGVAAAVAA IAAATAASSS AGKDENMAKT DMAVASAATL VAAQCVEAAE VMGAERDHLA SVVSSAVNVR SAGDIMTLTA GAATALRGVA TLKARAMKEV
301: WHIASVIPMD KGINLGGCSN VNGNGSYVSS SSSHSGEFLV EDNFLGHCNR EWLARGGQLL KRTRKGDLHW KIVSVYINRL NQVILKMKSR HVGGTFTKKN
401: KSKRNSYPYY AYT
Arabidopsis Description
Auxin canalization protein (DUF828) [Source:UniProtKB/TrEMBL;Acc:Q9LUI0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.