Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94369 | Canola | cytosol, plastid, vacuole | 42.49 | 93.55 |
| CDY72083 | Canola | cytosol | 20.51 | 87.5 |
| Bra012086.1-P | Field mustard | mitochondrion | 52.01 | 66.98 |
| Bra023238.1-P | Field mustard | mitochondrion | 73.26 | 59.35 |
| CDY70621 | Canola | plastid | 21.61 | 45.38 |
| CDX73515 | Canola | cytosol | 17.95 | 28.32 |
| CDY59158 | Canola | plastid | 26.74 | 25.35 |
| CDY54029 | Canola | plastid | 26.74 | 25.26 |
| CDX67576 | Canola | plastid | 26.37 | 24.91 |
| TraesCS1D01G280900.1 | Wheat | plastid | 21.98 | 20.34 |
| TraesCS1B01G290800.1 | Wheat | plastid | 21.98 | 20.34 |
| TraesCS1A01G281700.1 | Wheat | plastid | 21.98 | 20.34 |
| Os05t0455700-02 | Rice | plastid | 22.34 | 20.27 |
| HORVU1Hr1G072750.2 | Barley | plasma membrane | 22.34 | 19.18 |
| CDY07890 | Canola | cytosol | 4.03 | 11.58 |
| CDY70546 | Canola | cytosol | 4.03 | 11.58 |
| CDY54439 | Canola | cytosol | 3.66 | 10.53 |
| CDY50103 | Canola | cytosol | 11.36 | 9.42 |
| CDY00155 | Canola | cytosol | 15.02 | 8.99 |
| CDY17380 | Canola | cytosol | 12.09 | 7.05 |
| CDY28618 | Canola | cytosol | 12.09 | 7.05 |
| CDX89330 | Canola | cytosol | 12.09 | 7.02 |
| CDX97201 | Canola | cytosol | 1.83 | 6.67 |
| CDY52697 | Canola | cytosol | 11.72 | 6.67 |
| CDY36391 | Canola | cytosol | 11.72 | 6.58 |
| CDY28487 | Canola | cytosol | 11.36 | 6.42 |
| CDY34172 | Canola | cytosol | 11.36 | 6.42 |
| CDY13688 | Canola | cytosol | 11.36 | 6.42 |
| CDX83666 | Canola | cytosol | 11.36 | 6.42 |
| CDY07734 | Canola | plastid | 1.83 | 6.41 |
| CDY42388 | Canola | cytosol | 10.99 | 6.37 |
| CDY10528 | Canola | cytosol | 10.26 | 6.09 |
| CDY59208 | Canola | plastid | 8.06 | 5.54 |
| CDY22582 | Canola | plastid | 8.06 | 5.54 |
| CDY41745 | Canola | plastid | 8.06 | 5.49 |
| CDX84108 | Canola | plastid | 8.06 | 5.49 |
| CDY20046 | Canola | cytosol | 15.02 | 4.73 |
| CDX75814 | Canola | endoplasmic reticulum, extracellular | 1.1 | 4.17 |
| CDX94320 | Canola | cytosol | 12.09 | 3.79 |
| CDY13403 | Canola | cytosol | 1.83 | 3.6 |
| CDY35538 | Canola | plastid | 3.66 | 3.13 |
| CDX89329 | Canola | cytosol | 0.37 | 0.28 |
Protein Annotations
| EnsemblPlants:CDY07735 | EnsemblPlantsGene:GSBRNA2T00124856001 | ProteinID:CDY07735 | ProteinID:CDY07735.1 | UniParc:UPI0004EF06DB | UniProt:A0A078F030 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA03g17760DBnaA03g17760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F030]
Coordinates
chrLK031980:+:648653..650342
Molecular Weight (calculated)
30339.3 Da
IEP (calculated)
9.179
GRAVY (calculated)
0.125
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKVLAPPHP LVKHWIFVMR NDQPPTAISL NSFEIVSGNA IAEIGRLLMF EASREWLPMV VGEIMTPVGA TSVELIERIS FGSVLQACLM PCVHSVASAS
101: QHRSICVKGN LVLKGNLFLR YVPHSLANSL HKMFYIEILT IICFFGETKD SNHYLFAGMV SRGRTFYATI LTSKQQFTGE EEIGLVWMHL LAVAGATVVS
201: SSFGKDEKMA KSEVAVATTL ADALYMKDDE VIAAKREHLA LTVNETMKKP SRMKIVDNEK SGRVTYQKLK KRC
101: QHRSICVKGN LVLKGNLFLR YVPHSLANSL HKMFYIEILT IICFFGETKD SNHYLFAGMV SRGRTFYATI LTSKQQFTGE EEIGLVWMHL LAVAGATVVS
201: SSFGKDEKMA KSEVAVATTL ADALYMKDDE VIAAKREHLA LTVNETMKKP SRMKIVDNEK SGRVTYQKLK KRC
001: MAASEASING SNRMLVFVPP HPLIKHWISV LRNEQTPCPV FRNAIAELGR LLMYEASREW LPTVVGEIMS PMGPASVEFI DPREPIAVVP ILRAGLALAE
101: HASSVLPANK IYHLGVSRDE KTLLPSVYLN KLPDEFPKNS RVFLVDPVLA TGGTIMAAMD LLKERGLSVQ QIKVICAIAA PPALSKLNEK FPGLHVYAGI
201: IDPEVNEKGY IIPGLGDAGD RSFGTETHWV K
101: HASSVLPANK IYHLGVSRDE KTLLPSVYLN KLPDEFPKNS RVFLVDPVLA TGGTIMAAMD LLKERGLSVQ QIKVICAIAA PPALSKLNEK FPGLHVYAGI
201: IDPEVNEKGY IIPGLGDAGD RSFGTETHWV K
Arabidopsis Description
UPPUracil phosphoribosyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M336]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.