Factsheet for Bra023238.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012086.1-P	Field mustard	mitochondrion	62.02	98.58
CDX94369	Canola	cytosol, plastid, vacuole	33.83	91.94
CDY72083	Canola	cytosol	16.62	87.5
CDY07735	Canola	plastid	59.35	73.26
Bra003159.1-P	Field mustard	plastid	23.15	34.67
Bra007034.1-P	Field mustard	plastid	24.63	28.52
TraesCS1D01G280900.1	Wheat	plastid	20.77	23.73
TraesCS1B01G290800.1	Wheat	plastid	20.77	23.73
TraesCS1A01G281700.1	Wheat	plastid	20.77	23.73
Os05t0455700-02	Rice	plastid	21.07	23.59
HORVU1Hr1G072750.2	Barley	plasma membrane	21.07	22.33
Bra035516.1-P	Field mustard	cytosol	5.34	9.42
Bra025537.1-P	Field mustard	cytosol	12.76	8.96
Bra002854.1-P	Field mustard	cytosol	12.17	8.76
Bra026427.1-P	Field mustard	cytosol	12.17	8.72
Bra032986.1-P	Field mustard	cytosol	12.46	8.7
Bra025256.1-P	Field mustard	cytosol	12.46	8.7
Bra030832.1-P	Field mustard	cytosol	9.2	6.89
Bra033861.1-P	Field mustard	plastid	7.12	6.08
Bra023235.1-P	Field mustard	plastid	7.12	6.05
Bra039077.1-P	Field mustard	mitochondrion	13.95	5.96
Bra026426.1-P	Field mustard	cytosol	0.3	0.28

Protein Annotations

EnsemblPlants:Bra023238.1	EnsemblPlants:Bra023238.1-P	EnsemblPlantsGene:Bra023238	PANTHER:PTHR31351	PANTHER:PTHR31351:SF16	UniParc:UPI00025422F2
UniProt:M4E387	MapMan:35.1	:	:	:	:

Description

AT3G53900 (E=3e-011) | uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative

Coordinates

chrA09:+:20373312..20376135

Molecular Weight (calculated)

37022.2 Da

IEP (calculated)

8.860

GRAVY (calculated)

-0.053

Length

337 amino acids

Sequence
(BLAST)

001: MGRDASTLWN PNLFSLAQDR RSLSEPFHLL SPCNTTVETL CSQILQGRES GCDKKWQAYG VGLLLLDAKV LAPPHPLVKH WIFVMRNDQP PTAISLNSFE
101: IVSGNAIAEI GRLLMFEASR EWLPMVVGEI MTPVGATSVE LIERISFGSV LQACLMPCVH SVASASQHRS ICVKGMISRG ATVVSSSFGK DEKMAKSEVA
201: VATTLADALY MKDDEVIAAK REHLALTVNE TMKKPSRMKI VDNEKSGRLV WMHLLAVAGA TVVSSSFGKD EKMAKSEVAV ATTLADALYM KDDEVIAAKR
301: EHLALTVNET MKKPSRMKIV DNEKSGRVTY QKLKKRC

Best Arabidopsis Sequence Match ( AT3G53900.2 )
(BLAST)

001: MACSIGNAFR CSSDTLRFAP RQQCSSRLNP NPSSFLSFNS SPILAQNLGA SSSSLSRRTI RARTKMAASE ASINGSNRML VFVPPHPLIK HWISVLRNEQ
101: TPCPVFRNAI AELGRLLMYE ASREWLPTVV GEIMSPMGPA SVEFIDPREP IAVVPILRAG LALAEHASSV LPANKIYHLG VSRDEKTLLP SVYLNKLPDE
201: FPKNSRVFLV DPVLATGGTI MAAMDLLKER GLSVQQIKVI CAIAAPPALS KLNEKFPGLH VYAGIIDPEV NEKGYIIPGL GDAGDRSFGT ETHWVK

Arabidopsis Description

UPPUracil phosphoribosyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M336]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.