Factsheet for Bra035516.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033861.1-P	Field mustard	plastid	97.38	47.09
Bra023235.1-P	Field mustard	plastid	96.34	46.35
Solyc08g076220.2.1	Tomato	plastid	92.15	44.0
PGSC0003DMT400024090	Potato	cytosol, extracellular, plastid	92.15	43.46
GSMUA_Achr5P03660_001	Banana	plastid	90.05	38.91
Bra003159.1-P	Field mustard	plastid	13.61	11.56
Bra007034.1-P	Field mustard	plastid	13.09	8.59
Bra025537.1-P	Field mustard	cytosol	19.37	7.71
Bra032986.1-P	Field mustard	cytosol	19.37	7.66
Bra026427.1-P	Field mustard	cytosol	18.32	7.45
Bra002854.1-P	Field mustard	cytosol	17.8	7.26
Bra025256.1-P	Field mustard	cytosol	18.32	7.25
Bra030832.1-P	Field mustard	cytosol	16.23	6.89
Bra023238.1-P	Field mustard	mitochondrion	9.42	5.34
Bra012086.1-P	Field mustard	mitochondrion	5.76	5.19
Bra039077.1-P	Field mustard	mitochondrion	18.32	4.44
Bra026426.1-P	Field mustard	cytosol	2.09	1.12

Protein Annotations

MapMan:1.2.11	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra035516	EnsemblPlants:Bra035516.1	EnsemblPlants:Bra035516.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	UniProt:M4F366	InterPro:P-loop_NTPase
PFAM:PF00485	InterPro:PRK/URK	PANTHER:PTHR10285	PANTHER:PTHR10285:SF120	SUPFAM:SSF52540	UniParc:UPI0002546375
SEG:seg	:	:	:	:	:

Description

AT1G32060 (E=1e-099) PRK | PRK (PHOSPHORIBULOKINASE); ATP binding / phosphoribulokinase/ protein binding

Coordinates

chrA08:-:8053221..8053971

Molecular Weight (calculated)

21519.5 Da

IEP (calculated)

4.694

GRAVY (calculated)

-0.313

Length

191 amino acids

Sequence
(BLAST)

001: MAERGHSLES IKASIEARKP DFDAFIDPQK QYADAVIEVL PTQLIPDDNE GKVLRVRLIM KEGVKYFSPV YLFDEGSTIS WIPCGRKLTC SYPGIKFNYE
101: PDTYFDHEVS VLEMDGQFDR LDELIYVESH LSNLSSKFYG EVTQQMLKHA DFPGSNNGTG LFQTIVGLKI RDLYEQLIAN KATAPAEAAK A

Best Arabidopsis Sequence Match ( AT1G32060.1 )
(BLAST)

001: MAVSTIYSTQ ALNSTHFLTS SSSSKQVFLY RRQPQTNRRF NTLITCAQET IVIGLAADSG CGKSTFMRRL TSVFGGAAKP PKGGNPDSNT LISDTTTVIC
101: LDDYHSLDRY GRKEQKVTAL DPRANDFDLM YEQVKALKNG IAVEKPIYNH VTGLLDPPEL IQPPKILVIE GLHPMFDERV RDLLDFSIYL DISNEVKFAW
201: KIQRDMAERG HSLESIKASI EARKPDFDAF IDPQKQYADA VIEVLPTTLI PDDNEGKVLR VRLIMKEGVK YFSPVYLFDE GSTISWIPCG RKLTCSYPGI
301: KFNYEPDSYF DHEVSVLEMD GQFDRLDELI YVESHLSNLS TKFYGEVTQQ MLKHADFPGS NNGTGLFQTI VGLKIRDLYE QLIANKATAR AEAKA

Arabidopsis Description

PRKPhosphoribulokinase [Source:UniProtKB/TrEMBL;Acc:A0A178WLP9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.