Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plastid:
20363867
plastid: 22908117 plastid: 28183294 |
msms PMID:
22908117
doi
Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.
msms PMID:
20363867
doi
Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.
msms PMID:
28183294
doi
Center of Genetics Engineering (CEINGE) Biotecnologie Avanzate S.c. a R.l, via Pansini, 80100, Napoli, Italy., Department of Molecular Medicine and Medical Biotechnology, University of Naples Federico II, via Pansini, 80100, Napoli, Italy., Institute for the Animal Production System in the Mediterranean Environment, National Research Council of Italy (CNR-ISPAAM), via Argine 1085, 80147, Napoli, Italy., Institute of Biosciences and BioResources, National Research Council of Italy (CNR-IBBR), via Università 133, 80055, Portici, NA, Italy., Institute of Biosciences and BioResources, National Research Council of Italy (CNR-IBBR), via Università 133, 80055, Portici, NA, Italy. nscotti@unina.it.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400022940 | Potato | cytosol | 44.76 | 98.46 |
| CDX73515 | Canola | cytosol | 48.25 | 79.77 |
| VIT_08s0007g01100.t01 | Wine grape | cytosol | 63.29 | 79.74 |
| CDY70621 | Canola | plastid | 35.31 | 77.69 |
| Bra003159.1-P | Field mustard | plastid | 60.49 | 76.89 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane, plastid | 63.99 | 68.03 |
| KRH75660 | Soybean | plastid | 66.08 | 66.08 |
| CDY54029 | Canola | plastid | 65.38 | 64.71 |
| Bra007034.1-P | Field mustard | plastid | 65.38 | 64.26 |
| CDX67576 | Canola | plastid | 63.64 | 62.98 |
| CDY59158 | Canola | plastid | 63.29 | 62.85 |
| AT3G53900.2 | Thale cress | plastid | 65.03 | 62.84 |
| TraesCS1A01G281700.1 | Wheat | plastid | 61.89 | 60.0 |
| TraesCS1D01G280900.1 | Wheat | plastid | 61.89 | 60.0 |
| TraesCS1B01G290800.1 | Wheat | plastid | 61.54 | 59.66 |
| Os05t0455700-02 | Rice | plastid | 61.89 | 58.8 |
| HORVU1Hr1G072750.2 | Barley | plasma membrane | 61.89 | 55.66 |
| KRH65897 | Soybean | plastid | 67.13 | 52.75 |
| Solyc03g063860.1.1 | Tomato | cytosol | 25.87 | 51.39 |
| Solyc06g065580.2.1 | Tomato | cytosol | 25.52 | 15.11 |
| Solyc02g067880.1.1 | Tomato | cytosol | 23.08 | 14.83 |
| Solyc10g005880.2.1 | Tomato | cytosol | 21.33 | 14.46 |
| Solyc07g065890.2.1 | Tomato | cytosol, plastid | 21.68 | 13.9 |
| Solyc08g076220.2.1 | Tomato | plastid | 10.84 | 7.75 |
Protein Annotations
| KEGG:00240+2.4.2.9 | Gene3D:3.40.50.2020 | MapMan:6.2.2.2 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004845 | GO:GO:0004849 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006206 | GO:GO:0006222 | GO:GO:0006223 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009116 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016740 | GO:GO:0043097 | UniProt:K4CRF6 | PFAM:PF14681 | InterPro:PRTase-like |
| InterPro:PRibTrfase_dom | PANTHER:PTHR10285 | PANTHER:PTHR10285:SF46 | SUPFAM:SSF53271 | EnsemblPlantsGene:Solyc09g011300.2 | EnsemblPlants:Solyc09g011300.2.1 |
| TIGRFAMs:TIGR01091 | UniParc:UPI000276B14A | InterPro:Ura_phspho_trans | SEG:seg | : | : |
Description
Uracil phosphoribosyltransferase, chloroplastic [Source:Projected from Arabidopsis thaliana (AT3G53900) UniProtKB/Swiss-Prot;Acc:Q9M336]
Coordinates
chr9:+:4641043..4645919
Molecular Weight (calculated)
31393.2 Da
IEP (calculated)
8.466
GRAVY (calculated)
-0.008
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MACHLFIYTH PHLRLPPDPP LTLQSSSSSS AASYCRQNLP TLNFHYKKGF NFYTGRKRVV CSMATENKVI SGDRMLVFVP PHPLIKHWVS VLRNEQTPCP
101: VFKNAMAELG RLLIYEASRD WLPTITGEIQ SPMGIASVEF VDPREPVAIV PILRAGLALA EHATSILPAT KTYHLGVSRN EETLQPSVYL NKLPDKFPEG
201: SRVIVVDPML ATGGTIVAAI DLIKERGVDN SQIKVVCAVA APPALTKLSE KYPRLHVYAG ILDPTVNEKG FIIPGLGDAG DRSFDT
101: VFKNAMAELG RLLIYEASRD WLPTITGEIQ SPMGIASVEF VDPREPVAIV PILRAGLALA EHATSILPAT KTYHLGVSRN EETLQPSVYL NKLPDKFPEG
201: SRVIVVDPML ATGGTIVAAI DLIKERGVDN SQIKVVCAVA APPALTKLSE KYPRLHVYAG ILDPTVNEKG FIIPGLGDAG DRSFDT
001: MACSIGNAFR CSSDTLRFAP RQQCSSRLNP NPSSFLSFNS SPILAQNLGA SSSSLSRRTI RARTKMAASE ASINGSNRML VFVPPHPLIK HWISVLRNEQ
101: TPCPVFRNAI AELGRLLMYE ASREWLPTVV GEIMSPMGPA SVEFIDPREP IAVVPILRAG LALAEHASSV LPANKIYHLG VSRDEKTLLP SVYLNKLPDE
201: FPKNSRVFLV DPVLATGGTI MAAMDLLKER GLSVQQIKVI CAIAAPPALS KLNEKFPGLH VYAGIIDPEV NEKGYIIPGL GDAGDRSFGT ETHWVK
101: TPCPVFRNAI AELGRLLMYE ASREWLPTVV GEIMSPMGPA SVEFIDPREP IAVVPILRAG LALAEHASSV LPANKIYHLG VSRDEKTLLP SVYLNKLPDE
201: FPKNSRVFLV DPVLATGGTI MAAMDLLKER GLSVQQIKVI CAIAAPPALS KLNEKFPGLH VYAGIIDPEV NEKGYIIPGL GDAGDRSFGT ETHWVK
Arabidopsis Description
UPPUracil phosphoribosyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M336]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.