Factsheet for Zm00001d024109_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG25691	Sorghum	cytosol	90.35	83.4
GSMUA_Achr6P04960_001	Banana	cytosol	63.16	64.86
CDX73515	Canola	cytosol	47.81	63.01
VIT_08s0007g01100.t01	Wine grape	cytosol	62.28	62.56
PGSC0003DMT400022940	Potato	cytosol	34.65	60.77
Bra003159.1-P	Field mustard	plastid	58.77	59.56
CDY70621	Canola	plastid	33.77	59.23
KRH75660	Soybean	plastid	60.96	48.6
CDY54029	Canola	plastid	60.09	47.4
CDY59158	Canola	plastid	59.65	47.22
Bra007034.1-P	Field mustard	plastid	60.09	47.08
Zm00001d038362_P002	Maize	plastid	59.65	46.9
CDX67576	Canola	plastid	59.21	46.71
AT3G53900.2	Thale cress	plastid	58.77	45.27
KRH65897	Soybean	plastid	60.96	38.19
Solyc03g063860.1.1	Tomato	cytosol	22.81	36.11
Zm00001d016489_P001	Maize	cytosol	6.14	21.54
Zm00001d033026_P001	Maize	cytosol	3.95	15.52
Zm00001d006084_P003	Maize	cytosol	27.63	12.65
Zm00001d031602_P002	Maize	cytosol	26.32	12.27
Zm00001d054105_P012	Maize	cytosol	21.93	9.12
Zm00001d045018_P001	Maize	cytosol	3.95	7.96
Zm00001d000164_P001	Maize	plastid	11.4	6.27
Zm00001d017711_P001	Maize	plastid	10.96	6.17
Zm00001d002454_P002	Maize	plastid	9.21	5.04

Protein Annotations

KEGG:00240+2.4.2.9	EntrezGene:100286008	Gene3D:3.40.50.2020	MapMan:6.2.2.2	ProteinID:AQK40672.1	UniProt:B6U5U2
EMBL:EU972607	EMBL:EU975149	GO:GO:0003674	GO:GO:0003824	GO:GO:0004845	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006223
GO:GO:0006950	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009116
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009605	GO:GO:0009987	GO:GO:0009991
GO:GO:0016036	GO:GO:0016740	GO:GO:0016757	GO:GO:0032502	PFAM:PF14681	InterPro:PRTase-like
InterPro:PRibTrfase_dom	PANTHER:PTHR10285	PANTHER:PTHR10285:SF46	SUPFAM:SSF53271	TIGRFAMs:TIGR01091	UniParc:UPI000182E7AE
InterPro:Ura_phspho_trans	EnsemblPlantsGene:Zm00001d024109	EnsemblPlants:Zm00001d024109_P001	EnsemblPlants:Zm00001d024109_T001	:	:

Description

Uracil phosphoribosyltransferase

Coordinates

chr10:+:46166547..46169418

Molecular Weight (calculated)

24702.3 Da

IEP (calculated)

6.934

GRAVY (calculated)

0.167

Length

228 amino acids

Sequence
(BLAST)

001: MENCNNGQAA AVSMDDFKVV VPVHPLISHW VSVLRDRSTP SHAFRSAMGE LGRLLIYEAT RDWLPTVTRQ IQSPVGTEVV ESVSEMEPIM IVPILRAGLA
101: LADLATSILP STRTFHLGMA RDETTLMASV YLNKLPDRFP KGCKILIVDP MLATGGTVTA AVDLVMERGA EISQIKIISA VAAPPALKKL NQRFPRICVY
201: TGAMDQIVNE KGFIIPGLGD AGDRSYGT

Best Arabidopsis Sequence Match ( AT3G53900.2 )
(BLAST)

001: MACSIGNAFR CSSDTLRFAP RQQCSSRLNP NPSSFLSFNS SPILAQNLGA SSSSLSRRTI RARTKMAASE ASINGSNRML VFVPPHPLIK HWISVLRNEQ
101: TPCPVFRNAI AELGRLLMYE ASREWLPTVV GEIMSPMGPA SVEFIDPREP IAVVPILRAG LALAEHASSV LPANKIYHLG VSRDEKTLLP SVYLNKLPDE
201: FPKNSRVFLV DPVLATGGTI MAAMDLLKER GLSVQQIKVI CAIAAPPALS KLNEKFPGLH VYAGIIDPEV NEKGYIIPGL GDAGDRSFGT ETHWVK

Arabidopsis Description

UPPUracil phosphoribosyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M336]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.