Factsheet for VIT_14s0171g00090.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016489_P001	Maize	cytosol	11.62	86.15
AT5G40870.1	Thale cress	cytosol, plastid	86.51	85.8
AT3G27190.1	Thale cress	cytosol	85.89	85.71
GSMUA_Achr5P25140_001	Banana	cytosol	85.48	85.65
VIT_17s0000g01620.t01	Wine grape	cytosol	83.61	85.38
CDY13688	Canola	cytosol	85.27	85.09
CDY28487	Canola	cytosol	85.27	85.09
CDY52697	Canola	cytosol	84.65	85.0
Bra025537.1-P	Field mustard	cytosol	84.65	85.0
CDY34172	Canola	cytosol	85.06	84.89
CDX83666	Canola	cytosol	85.06	84.89
Bra032986.1-P	Field mustard	cytosol	85.06	84.89
Bra025256.1-P	Field mustard	cytosol	85.06	84.89
CDY36391	Canola	cytosol	84.65	83.95
KRH03946	Soybean	cytosol, plastid	77.39	81.98
EES15317	Sorghum	plastid	79.88	80.88
TraesCS7D01G260200.1	Wheat	cytosol	79.46	80.46
EER99151	Sorghum	cytosol	81.74	80.41
TraesCS7B01G157000.1	Wheat	cytosol	79.25	79.92
Os09t0505800-01	Rice	plasma membrane	81.74	79.44
Os08t0530000-01	Rice	plasma membrane	80.71	79.23
TraesCS7A01G259200.2	Wheat	cytosol	79.88	78.73
Zm00001d006084_P003	Maize	cytosol	81.33	78.71
TraesCS5B01G284500.1	Wheat	cytosol	79.67	78.37
TraesCS5A01G285300.1	Wheat	cytosol	79.88	78.25
Zm00001d031602_P002	Maize	cytosol	77.59	76.48
VIT_19s0015g01730.t01	Wine grape	cytosol	75.52	75.99
HORVU7Hr1G053940.14	Barley	cytosol	73.86	74.79
TraesCS5D01G292700.1	Wheat	plastid	79.05	73.98
VIT_17s0000g01600.t01	Wine grape	cytosol	34.23	72.69
HORVU5Hr1G076150.7	Barley	cytosol	79.25	71.4
HORVU4Hr1G025660.3	Barley	cytosol	20.75	49.02
VIT_08s0007g01100.t01	Wine grape	cytosol	14.32	30.4
VIT_14s0066g00270.t01	Wine grape	endoplasmic reticulum, golgi	63.9	29.96
VIT_16s0039g02140.t01	Wine grape	plastid	15.98	18.87
VIT_02s0109g00080.t01	Wine grape	plastid	15.15	17.89

Protein Annotations

KEGG:00240+2.4.2.9+2.7.1.48	KEGG:00240+2.7.1.48	KEGG:00983+2.7.1.48	EntrezGene:100257790	wikigene:100257790	Gene3D:3.40.50.2020
Gene3D:3.40.50.300	MapMan:6.2.2.1	EMBL:AM458878	ProteinID:CAN74540	ProteinID:CAN74540.1	ProteinID:CCB62216
ProteinID:CCB62216.1	UniProt:F6I5J8	EMBL:FN596749	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004849	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006206	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009116	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0043097	GO:GO:0044206	GO:GO:0044211	EntrezGene:LOC100257790	wikigene:LOC100257790	InterPro:P-loop_NTPase
PFAM:PF00485	PFAM:PF14681	PRINTS:PR00988	InterPro:PRK/URK	InterPro:PRTase-like	InterPro:PRibTrfase_dom
PANTHER:PTHR10285	PANTHER:PTHR10285:SF115	SUPFAM:SSF52540	SUPFAM:SSF53271	TIGR:TC70649	TIGRFAMs:TIGR00235
InterPro:UCKL_plant	UniParc:UPI0002108C05	InterPro:Uridine_kinase-like	ArrayExpress:VIT_14s0171g00090	EnsemblPlantsGene:VIT_14s0171g00090	EnsemblPlants:VIT_14s0171g00090.t01
RefSeq:XP_003633787	RefSeq:XP_003633787.1	RefSeq:XP_003633788	RefSeq:XP_003633788.1	SEG:seg	:

Description

Uridine kinase [Source:UniProtKB/TrEMBL;Acc:F6I5J8]

Coordinates

chr14:-:25965369..25980086

Molecular Weight (calculated)

53550.3 Da

IEP (calculated)

6.790

GRAVY (calculated)

-0.142

Length

482 amino acids

Sequence
(BLAST)

001: MPEETTAIDY VMEAASGPHF SGLRLEGLLS SPPSATSSPS AAASATSSFS ATLPDSAAKQ PFVIGVSGGT ASGKTTVCDM IIQQLHDHRV VLVNQDSFYR
101: GLTAEESERV HEYNFDHPDA FDTEQLLECI GKLKSGQSVH VPIYDFKNHR RCSGSFRQVN VSDVIILEGI LVFHDQRVRN LMNMKIFVDT DADVRLARRI
201: RRDTVERGRD VNSVLEQYAK FVKPAFDDFV MPSKKYADVI IPRGGDNHVA IDLIVQHIHT KLGQHNLCKI YPNVNVIQST FQIRGMHTLI RDHEISKHDF
301: VFYSDRLIRL VVEHGLGHLP FTEKQVVTPT GSLYTGVDFC KKLCGVSIVR SGESMENALR ACCKGIKIGK ILIHRDGDNG KQLIYEKLPK DISERHVLLL
401: DPVLATGNSA GQAIELLIQK GVPESHIIFL NLISAPEGIH CVCKRFPSLK IVTSEIDVAL NEEFRVIPGM GEFGDRYFGT DD

Best Arabidopsis Sequence Match ( AT5G40870.1 )
(BLAST)

001: MPEDSSSLDY AMEKASGPHF SGLRFDGLLS SSPPNSSVVS SLRSAVSSSS PSSSDPEAPK QPFIIGVSGG TASGKTTVCD MIIQQLHDHR VVLVNQDSFY
101: RGLTSEELQR VQEYNFDHPD AFDTEQLLHC AETLKSGQPY QVPIYDFKTH QRRSDTFRQV NASDVIILEG ILVFHDSRVR NLMNMKIFVD TDADVRLARR
201: IRRDTVERGR DVNSVLEQYA KFVKPAFDDF VLPSKKYADV IIPRGGDNHV AVDLITQHIH TKLGQHDLCK IYPNVYVIQS TFQIRGMHTL IREKDISKHD
301: FVFYSDRLIR LVVEHGLGHL PFTEKQVVTP TGAVYTGVDF CKKLCGVSII RSGESMENAL RACCKGIKIG KILIHRDGDN GKQLIYEKLP HDISERHVLL
401: LDPVLATGNS ANQAIELLIQ KGVPEAHIIF LNLISAPEGI HCVCKRFPAL KIVTSEIDQC LNQEFRVIPG LGEFGDRYFG TDEEDQ

Arabidopsis Description

UKL1Uridine kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UHR6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.