Factsheet for VIT_17s0000g01620.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 6
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g065580.2.1	Tomato	cytosol	85.59	83.64
VIT_14s0171g00090.t01	Wine grape	cytosol	85.38	83.61
PGSC0003DMT400067208	Potato	cytosol, plastid	85.59	83.3
VIT_17s0000g01600.t01	Wine grape	cytosol	38.14	79.3
VIT_19s0015g01730.t01	Wine grape	cytosol	74.36	73.28
VIT_08s0007g01100.t01	Wine grape	cytosol	15.47	32.16
VIT_14s0066g00270.t01	Wine grape	endoplasmic reticulum, golgi	64.62	29.67
VIT_16s0039g02140.t01	Wine grape	plastid	17.37	20.1
VIT_02s0109g00080.t01	Wine grape	plastid	16.31	18.87

Protein Annotations

KEGG:00240+2.4.2.9+2.7.1.48	KEGG:00240+2.7.1.48	KEGG:00983+2.7.1.48	EntrezGene:100257659	wikigene:100257659	Gene3D:3.40.50.2020
Gene3D:3.40.50.300	MapMan:6.2.2.1	EMBL:AM456869	ProteinID:CAN81072	ProteinID:CAN81072.1	ProteinID:CBI15643
ProteinID:CBI15643.3	UniProt:D7SGW3	EMBL:FN594950	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004849	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006206	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009116	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0043097	GO:GO:0044206	GO:GO:0044211	EntrezGene:LOC100257659	wikigene:LOC100257659	InterPro:P-loop_NTPase
PFAM:PF00485	PFAM:PF14681	PRINTS:PR00988	InterPro:PRK/URK	InterPro:PRTase-like	InterPro:PRibTrfase_dom
PANTHER:PTHR10285	PANTHER:PTHR10285:SF115	SUPFAM:SSF52540	SUPFAM:SSF53271	TIGRFAMs:TIGR00235	InterPro:UCKL_plant
UniParc:UPI0001984F0D	InterPro:Uridine_kinase-like	ArrayExpress:VIT_17s0000g01620	EnsemblPlantsGene:VIT_17s0000g01620	EnsemblPlants:VIT_17s0000g01620.t01	RefSeq:XP_002283599
RefSeq:XP_002283599.1	SEG:seg	:	:	:	:

Description

Uridine kinase [Source:UniProtKB/TrEMBL;Acc:D7SGW3]

Coordinates

chr17:-:1190919..1197807

Molecular Weight (calculated)

52891.7 Da

IEP (calculated)

7.028

GRAVY (calculated)

-0.143

Length

472 amino acids

Sequence
(BLAST)

001: METPSGAHFY GLRPDGLLSS SASSPRSPSS SLSVPSGDHS LPKQPFVIGV TGGTASGKTT VCDMIIQQLH DHRVVLVNQD SFYRGLTAKE LEDVHKYNFD
101: HPDAFDTEQL LDCIHKLKSG QSVHVPIYDF KTHQRCSDSF RQVNASDVII LEGILVFHDQ CVRDLMNMKI FVDADADVRL ARRISRDTVE RGRDIQSVLE
201: QYAKFVKPAF DNFILPSKKF ADVIIPRGGE NHVAIDLIVQ HIRTKLGQHD LCKIYPNVNV IHSTFQIRGM HTLIRDREIS KHDFVFYSDR LIRLVVEHGL
301: GYLPFLEKQV FTPTGSVYTG VEFCKKLCGV SIIRSGESME NALRACCKGI KIGKILIHRD GDNGKQLIYE KLPKDISERH VLLLDPVLAT GNSANQAIEL
401: LIKKGVPESS IIFLNLISAP EGIQCVCNRF PSLKIVTSEI DAKLNEEFRV IPGLGEFGDR YFGTDDYFVP IE

Best Arabidopsis Sequence Match ( AT5G40870.1 )
(BLAST)

001: MPEDSSSLDY AMEKASGPHF SGLRFDGLLS SSPPNSSVVS SLRSAVSSSS PSSSDPEAPK QPFIIGVSGG TASGKTTVCD MIIQQLHDHR VVLVNQDSFY
101: RGLTSEELQR VQEYNFDHPD AFDTEQLLHC AETLKSGQPY QVPIYDFKTH QRRSDTFRQV NASDVIILEG ILVFHDSRVR NLMNMKIFVD TDADVRLARR
201: IRRDTVERGR DVNSVLEQYA KFVKPAFDDF VLPSKKYADV IIPRGGDNHV AVDLITQHIH TKLGQHDLCK IYPNVYVIQS TFQIRGMHTL IREKDISKHD
301: FVFYSDRLIR LVVEHGLGHL PFTEKQVVTP TGAVYTGVDF CKKLCGVSII RSGESMENAL RACCKGIKIG KILIHRDGDN GKQLIYEKLP HDISERHVLL
401: LDPVLATGNS ANQAIELLIQ KGVPEAHIIF LNLISAPEGI HCVCKRFPAL KIVTSEIDQC LNQEFRVIPG LGEFGDRYFG TDEEDQ

Arabidopsis Description

UKL1Uridine kinase [Source:UniProtKB/TrEMBL;Acc:A0A178UHR6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.