Factsheet for PGSC0003DMT400017925

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g067880.1.1	Tomato	cytosol	98.32	78.88
PGSC0003DMT400037253	Potato	cytosol	78.99	60.39
CDY00155	Canola	cytosol	75.63	59.21
AT3G27440.1	Thale cress	cytosol	76.19	58.49
KRG93941	Soybean	cytosol	73.11	57.11
CDY07890	Canola	cytosol	14.85	55.79
CDY70546	Canola	cytosol	14.85	55.79
PGSC0003DMT400067208	Potato	cytosol, plastid	74.51	54.85
CDY54439	Canola	cytosol	14.29	53.68
Bra039077.1-P	Field mustard	mitochondrion	75.91	34.39
CDY20046	Canola	cytosol	75.91	31.29
VIT_14s0066g00270.t01	Wine grape	endoplasmic reticulum, golgi	73.95	25.68
PGSC0003DMT400022940	Potato	cytosol	7.0	19.23
PGSC0003DMT400024090	Potato	cytosol, extracellular, plastid	15.13	13.33

Protein Annotations

KEGG:00240+2.7.1.48	KEGG:00983+2.7.1.48	Gene3D:3.40.50.2020	Gene3D:3.40.50.300	MapMan:6.2.2.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009116	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
UniProt:M1A9R0	InterPro:P-loop_NTPase	PFAM:PF00485	PFAM:PF14681	EnsemblPlantsGene:PGSC0003DMG400006962	PGSC:PGSC0003DMG400006962
EnsemblPlants:PGSC0003DMT400017925	PRINTS:PR00988	InterPro:PRK/URK	InterPro:PRTase-like	InterPro:PRibTrfase_dom	PANTHER:PTHR10285
PANTHER:PTHR10285:SF75	SUPFAM:SSF52540	SUPFAM:SSF53271	UniParc:UPI0002950B48	InterPro:Uridine_kinase-like	SEG:seg

Description

Uridine kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400006962]

Coordinates

chr2:-:26577704..26580316

Molecular Weight (calculated)

40022.9 Da

IEP (calculated)

9.820

GRAVY (calculated)

-0.093

Length

357 amino acids

Sequence
(BLAST)

001: MEELKHGRGI NIPNYDFKLH RSVEPARVVN PSDVIILDGI LILHDPRIRD LMNMKIFVDS DSDVRLARRI RRDTVERNRN ILNVLDQYSK HVKPGFEDFI
101: RPTKKYADVI IPRGADNDVA IDLIVQHIRT KLGQHDLCKI YSNVFVIQST FQIRGMHTLV RNAKTTKHDF VFYADRLIRL VVEHGLGHLP FTEKQIITPT
201: GSVYSGVVFC KRLCGVSIIR SGESMENALR ACCKGIKIGK ILIHGEGKSG RQLIYEKLPS DIASRHVLLL DPVLASGNSA VKAISVLLSK GVPESNIVFL
301: NLISAPEGLH TVCNKYPRLK IVTSEIDTTL NKDLHVIPGM GEFGDRYFGT GSRVTSS

Best Arabidopsis Sequence Match ( AT1G55810.6 )
(BLAST)

001: MASKSDVNII ETSSKVHFSG FHQMDGLASN RPEQMAEEEE HGQPFVIGVA GGAASGKTTV CDMIMQQLHD QRAVVVNQDS FYHNVNEVEL VRVHDYNFDH
101: PDAFDTEQLL SSMEKLRKGQ AVDIPNYDFK SYKNNVFPPR RVNPSDVIIL EGILIFHDPR VRDLMNMKIF VDADADVRLA RRIKRDTVEK GRDIATVLDQ
201: YSKFVKPAFE DFILPTKKYA DIIIPRGGDN HVAIDLIVQH IHTKLGQHDL CKIYPNLYVI QSTFQIRGMH TLIRDSKTTK HDFIFYSDRL IRLVVEHGLG
301: HLPFTEKQVV TPTGSVYSGV DFCKKLCGVS VIRSGESMEN ALRACCKGIK IGKILIHREG DNGQQLIYEK LPSDISERHV LLLDPILGTG NSAVQAIRLL
401: ISKGVPESNI IFLNLISAPE GVNVVCKKFP RIKIVTSEIE LGLNDEFRVV PGMGEFGDRY FGTDDE

Arabidopsis Description

UKL3uridine kinase-like 3 [Source:TAIR;Acc:AT1G55810]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.