Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- vacuole 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra024839.1-P | |
| Bra024840.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G31570.1 | Bra024839.1-P | AT2G01950.1 | 19000166 |
| AT2G31570.1 | Bra024840.1-P | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10812 | Canola | cytosol | 100.0 | 100.0 |
| CDY54730 | Canola | cytosol | 100.0 | 100.0 |
| AT2G31570.1 | Thale cress | cytosol | 95.86 | 95.86 |
| Bra022853.1-P | Field mustard | cytosol | 95.27 | 95.27 |
| Solyc06g073460.2.1 | Tomato | plastid | 76.33 | 77.25 |
| Os11t0284900-01 | Rice | cytosol | 59.76 | 70.14 |
| Bra035211.1-P | Field mustard | cytosol | 65.68 | 64.91 |
| OQU83353 | Sorghum | endoplasmic reticulum | 75.74 | 62.44 |
| Bra004409.1-P | Field mustard | cytosol | 59.17 | 58.82 |
| Bra000302.1-P | Field mustard | endoplasmic reticulum | 66.86 | 57.36 |
| Bra033140.1-P | Field mustard | mitochondrion, plastid | 68.05 | 50.22 |
| Bra023978.1-P | Field mustard | plastid | 66.86 | 48.71 |
| Bra007819.1-P | Field mustard | plastid | 65.68 | 47.64 |
| Bra021456.1-P | Field mustard | cytosol | 57.4 | 47.32 |
| Bra003522.1-P | Field mustard | cytosol | 57.99 | 41.35 |
| Bra037370.1-P | Field mustard | extracellular, plastid | 21.3 | 40.0 |
Protein Annotations
| MapMan:10.4.2 | Gene3D:3.40.30.10 | EnsemblPlantsGene:Bra018232 | EnsemblPlants:Bra018232.1 | EnsemblPlants:Bra018232.1-P | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004601 | GO:GO:0004602 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0055114 | GO:GO:0098869 | InterPro:GPX_AS |
| InterPro:GPX_CS | InterPro:Glutathione_peroxidase | InterPro:IPR000889 | UniProt:M4DNZ2 | PFAM:PF00255 | PIRSF:PIRSF000303 |
| PRINTS:PR01011 | ScanProsite:PS00460 | ScanProsite:PS00763 | PFscan:PS51355 | PANTHER:PTHR11592 | PANTHER:PTHR11592:SF51 |
| SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI0001B33FFD | : | : | : |
Description
AT2G31570 (E=1e-091) ATGPX2 | ATGPX2 (GLUTATHIONE PEROXIDASE 2); glutathione peroxidase
Coordinates
chrA05:+:6850186..6851569
Molecular Weight (calculated)
18931.6 Da
IEP (calculated)
6.621
GRAVY (calculated)
-0.397
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MADESPKSIY DFTVKDISGN DVSLSQFKGK TLLIVNVASK CGLTDANYKE LNVLYEKYKE QGLEILAFPC NQFLGQEPGN NEEIQQTVCT RFKAEFPIFD
101: KVDVNGKNTA PLYKYLKAEK GGLLIDAIKW NFTKFLVSPD GKVSQRYSPR TSPLQFEKDI QALLGQASS
101: KVDVNGKNTA PLYKYLKAEK GGLLIDAIKW NFTKFLVSPD GKVSQRYSPR TSPLQFEKDI QALLGQASS
001: MADESPKSIY DFTVKDIGGN DVSLDQYKGK TLLVVNVASK CGLTDANYKE LNVLYEKYKE QGLEILAFPC NQFLGQEPGN NEEIQQTVCT RFKAEFPIFD
101: KVDVNGKNTA PLYKYLKAEK GGLLIDAIKW NFTKFLVSPD GKVLQRYSPR TSPLQFEKDI QTALGQASS
101: KVDVNGKNTA PLYKYLKAEK GGLLIDAIKW NFTKFLVSPD GKVLQRYSPR TSPLQFEKDI QTALGQASS
Arabidopsis Description
GPX2Probable glutathione peroxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:O04922]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.