Factsheet for Bra003522.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 2
mitochondrion 2
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra015543.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G63080.1	Bra015543.1-P	AT1G07000.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67915	Canola	cytosol	69.2	93.18
CDX79424	Canola	cytosol	67.93	91.48
AT3G63080.1	Thale cress	cytosol	62.87	86.13
Bra004409.1-P	Field mustard	cytosol	57.81	80.59
VIT_07s0104g00320.t01	Wine grape	cytosol	51.9	72.35
KRG95489	Soybean	cytosol	52.74	72.25
Zm00001d047448_P002	Maize	extracellular, mitochondrion, plasma membrane	51.48	71.76
KRH67169	Soybean	cytosol	51.48	71.76
Solyc09g064850.2.1	Tomato	nucleus	50.63	70.59
Os03t0358100-01	Rice	plasma membrane	48.95	68.64
Bra021456.1-P	Field mustard	cytosol	58.65	67.8
TraesCS4A01G142000.1	Wheat	cytosol	48.95	67.44
KRH71458	Soybean	endoplasmic reticulum	47.26	65.88
TraesCS4D01G162000.1	Wheat	plastid	51.9	65.78
TraesCS4B01G152800.1	Wheat	cytosol	51.9	65.78
GSMUA_Achr5P07930_001	Banana	cytosol	46.84	65.29
KRH31991	Soybean	cytosol	46.84	65.29
Bra035211.1-P	Field mustard	cytosol	46.41	64.33
KXG39330	Sorghum	cytosol	50.21	60.1
HORVU4Hr1G035380.1	Barley	cytosol	49.79	58.13
Bra018232.1-P	Field mustard	cytosol	41.35	57.99
Bra022853.1-P	Field mustard	cytosol	40.93	57.4
Bra000302.1-P	Field mustard	endoplasmic reticulum	38.82	46.7
Bra033140.1-P	Field mustard	mitochondrion, plastid	44.73	46.29
Bra023978.1-P	Field mustard	plastid	41.35	42.24
Bra007819.1-P	Field mustard	plastid	39.66	40.34
Bra037370.1-P	Field mustard	extracellular, plastid	14.77	38.89

Protein Annotations

MapMan:10.4.2	MapMan:11.10.1.6.1	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra003522	EnsemblPlants:Bra003522.1	EnsemblPlants:Bra003522.1-P
InterPro:DVL	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0004602
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006979	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009987
GO:GO:0012505	GO:GO:0016020	GO:GO:0016491	GO:GO:0055114	GO:GO:0098869	InterPro:GPX_AS
InterPro:GPX_CS	InterPro:Glutathione_peroxidase	InterPro:IPR000889	UniProt:M4CH39	PFAM:PF00255	PFAM:PF08137
PRINTS:PR01011	ScanProsite:PS00460	ScanProsite:PS00763	PFscan:PS51355	PANTHER:PTHR11592	PANTHER:PTHR11592:SF17
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000254195B	:	:	:

Description

AT3G63080 (E=7e-082) ATGPX5, MEE42 | ATGPX5 (glutathione peroxidase 5); glutathione peroxidase

Coordinates

chrA07:+:13605669..13610323

Molecular Weight (calculated)

26760.2 Da

IEP (calculated)

10.393

GRAVY (calculated)

-0.377

Length

237 amino acids

Sequence
(BLAST)

001: MGGSVSVSEK SIHEFTVKDS SGKEVDLSVY QGKVLLIVNV ASKCGFTETN YTQLTELYRK YKDQGLVILA FPCNQFLNQE PGTSQDAHEF ACTRFKAEYP
101: VFQKVRVNGQ NAAPVYKFLK SKKPSFLGSR IKWNFTKFLV GKDGQVIDRY GPTVPPLSIE QRNKSLNQSP SKQPKTIKTN SFGSFLGRIT MAATVVLSCS
201: SSTKVRTWKR YSKQIKEQRA RLYIIWKCAV FLLSSHD

Best Arabidopsis Sequence Match ( AT3G63080.1 )
(BLAST)

001: MGASSSSSVS EKSIHQFTVK DSSGKEVDLS VYQGKVLLVV NVASKCGFTE SNYTQLTELY RKYKDQGFVV LAFPCNQFLS QEPGTSEEAH QFACTRFKAE
101: YPVFQKVRVN GQNAAPVYKF LKSKKPSFLG SRIKWNFTKF LVGKDGQVID RYGTTVSPLS IQKDIEKALA QEL

Arabidopsis Description

GPX5Probable glutathione peroxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYB4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.