CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67169	Soybean	cytosol	86.13	87.65
VIT_07s0104g00320.t01	Wine grape	cytosol	79.77	81.18
KRH71458	Soybean	endoplasmic reticulum	72.25	73.53
KRH31991	Soybean	cytosol	71.68	72.94
Bra004409.1-P	Field mustard	cytosol	70.52	71.76
CDX80153	Canola	cytosol	70.52	71.76
CDX80155	Canola	cytosol	70.52	71.76
Solyc09g064850.2.1	Tomato	nucleus	69.94	71.18
CDY66093	Canola	cytosol	69.94	71.18
CDY72064	Canola	cytosol	70.52	70.11
AT2G48150.1	Thale cress	cytosol	68.79	70.0
Zm00001d047448_P002	Maize	extracellular, mitochondrion, plasma membrane	68.79	70.0
GSMUA_Achr5P07930_001	Banana	cytosol	68.79	70.0
AT3G63080.1	Thale cress	cytosol	69.94	69.94
CDX67915	Canola	cytosol	71.1	69.89
CDX79424	Canola	cytosol	71.1	69.89
CDY27457	Canola	cytosol	57.23	69.72
Os03t0358100-01	Rice	plasma membrane	67.05	68.64
CDY15038	Canola	cytosol	71.1	65.78
CDX89171	Canola	cytosol	67.05	65.17
KRH27931	Soybean	cytosol, endoplasmic reticulum	62.43	64.67
KRH59862	Soybean	nucleus	61.85	64.46
KRH77533	Soybean	endoplasmic reticulum, nucleus	61.85	64.07
TraesCS4A01G142000.1	Wheat	cytosol	63.58	63.95
CDX93937	Canola	cytosol	67.05	63.74
TraesCS4D01G162000.1	Wheat	plastid	67.05	62.03
TraesCS4B01G152800.1	Wheat	cytosol	67.05	62.03
KXG39330	Sorghum	cytosol	69.94	61.11
KRH27930	Soybean	cytosol	58.96	61.08
KRH41161	Soybean	cytosol	58.38	60.48
Bra021456.1-P	Field mustard	cytosol	71.1	60.0
KRH41733	Soybean	cytosol	57.23	59.64
KRH15634	Soybean	extracellular	37.57	57.02
HORVU4Hr1G035380.1	Barley	cytosol	66.47	56.65
Bra003522.1-P	Field mustard	cytosol	72.25	52.74
KRH60433	Soybean	extracellular	57.8	49.75
KRH41160	Soybean	nucleus	61.85	47.56
KRH05382	Soybean	plastid	60.12	44.44
KRH77534	Soybean	cytosol, mitochondrion	17.92	39.24

Protein Annotations

MapMan:10.4.2	Gene3D:3.40.30.10	EMBL:ACUP02012113	EnsemblPlantsGene:GLYMA_19G154100	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0004602	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	GO:GO:0098869	InterPro:GPX_AS	InterPro:GPX_CS
InterPro:Glutathione_peroxidase	UniProt:I1N9F3	InterPro:IPR000889	EnsemblPlants:KRG95489	ProteinID:KRG95489	ProteinID:KRG95489.1
PFAM:PF00255	PIRSF:PIRSF000303	PRINTS:PR01011	ScanProsite:PS00460	ScanProsite:PS00763	PFscan:PS51355
PANTHER:PTHR11592	PANTHER:PTHR11592:SF17	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00023DD7A5	:

Description

hypothetical protein

Coordinates

chr19:+:41429725..41434094

Molecular Weight (calculated)

19285.2 Da

IEP (calculated)

9.658

GRAVY (calculated)

-0.296

Length

173 amino acids

Sequence
(BLAST)

001: MGASASVTEK SIHEFMVKDA KGRDVNLSTY KGKVLLVVNV ASKCGFTNSN YTQLTELYSK YKDRGLEILA FPCNQFLKQE PGSSQEAEEF ACTRYKAEYP
101: IFGKVRVNGP DTAPVYKFLK ANKTGFLGSR IKWNFTKFLV DKEGHVLARY GPTTSPLSIE VQSLSISLHG VHM

Best Arabidopsis Sequence Match ( AT2G48150.1 )
(BLAST)

001: MGASASVPER SVHQFTVKDS SGKDLNMSIY QGKVLLIVNV ASKCGFTETN YTQLTELYRK YKDQDFEILA FPCNQFLYQE PGTSQEAHEF ACERFKAEYP
101: VFQKVRVNGQ NAAPIYKFLK ASKPTFLGSR IKWNFTKFLV GKDGLVIDRY GTMVTPLSIE KDIKKALEDA

Arabidopsis Description

GPX4Probable glutathione peroxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L910]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.