CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004409.1-P	Field mustard	cytosol	100.0	100.0
CDX80153	Canola	cytosol	100.0	100.0
CDY66093	Canola	cytosol	97.06	97.06
CDY72064	Canola	cytosol	98.82	96.55
CDY27457	Canola	cytosol	80.0	95.77
AT2G48150.1	Thale cress	cytosol	92.35	92.35
CDY15038	Canola	cytosol	93.53	85.03
CDX67915	Canola	cytosol	83.53	80.68
CDX79424	Canola	cytosol	82.94	80.11
CDX89171	Canola	cytosol	81.18	77.53
CDX93937	Canola	cytosol	81.76	76.37
Zm00001d047448_P002	Maize	extracellular, mitochondrion, plasma membrane	75.88	75.88
Os03t0358100-01	Rice	plasma membrane	72.94	73.37
KRH67169	Soybean	cytosol	72.94	72.94
Solyc09g064850.2.1	Tomato	nucleus	72.35	72.35
VIT_07s0104g00320.t01	Wine grape	cytosol	71.76	71.76
GSMUA_Achr5P07930_001	Banana	cytosol	71.76	71.76
KRG95489	Soybean	cytosol	71.76	70.52
TraesCS4B01G152800.1	Wheat	cytosol	75.88	68.98
TraesCS4D01G162000.1	Wheat	plastid	75.88	68.98
TraesCS4A01G142000.1	Wheat	cytosol	69.41	68.6
KRH71458	Soybean	endoplasmic reticulum	67.06	67.06
KRH31991	Soybean	cytosol	66.47	66.47
CDX86767	Canola	cytosol	66.47	66.08
CDY70265	Canola	cytosol	65.88	65.5
HORVU4Hr1G035380.1	Barley	cytosol	75.29	63.05
KXG39330	Sorghum	cytosol	71.18	61.11
CDX84772	Canola	cytosol	58.82	59.17
CDY54730	Canola	cytosol	58.82	59.17
CDY23931	Canola	cytosol	58.82	59.17
CDY10812	Canola	cytosol	58.82	59.17
CDY60808	Canola	cytosol	46.47	56.43
CDY25499	Canola	cytosol	53.53	54.82
CDY34354	Canola	cytosol	52.94	53.89
CDX83486	Canola	endoplasmic reticulum	55.29	47.72
CDY44221	Canola	endoplasmic reticulum	55.29	47.72
CDY37628	Canola	mitochondrion, plastid	63.53	47.16
CDY25288	Canola	mitochondrion, plastid	63.53	47.16
CDX72332	Canola	plastid	57.65	42.24
CDY01168	Canola	plastid	57.65	42.24
CDY13458	Canola	plastid	57.65	42.24
CDY69660	Canola	plastid	57.65	42.06
CDX76773	Canola	plastid	54.12	38.17
CDY07183	Canola	plastid	21.76	29.6

Protein Annotations

MapMan:10.4.2	Gene3D:3.40.30.10	GO:A0A078CYH3	EnsemblPlants:CDX80155	ProteinID:CDX80155	ProteinID:CDX80155.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004602	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0055114	InterPro:GPX_AS	InterPro:GPX_CS	EnsemblPlantsGene:GSBRNA2T00133070001	InterPro:Glutathione_peroxidase
InterPro:IPR000889	PFAM:PF00255	PIRSF:PIRSF000303	PRINTS:PR01011	ScanProsite:PS00460	ScanProsite:PS00763
PFscan:PS51355	PANTHER:PTHR11592	PANTHER:PTHR11592:SF17	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002547EF9

Description

BnaA05g00010D

Coordinates

chrLK031819:+:2149658..2150866

Molecular Weight (calculated)

19213.0 Da

IEP (calculated)

9.298

GRAVY (calculated)

-0.311

Length

170 amino acids

Sequence
(BLAST)

001: MGASVSVPER SVHQFTVKDS SGKDVNLSIY QGKVLLLVNV ASKCGFTESN YTQLTELYRK YKDQGFEILA FPCNQFLYQE PGTSQEAHEF ACTRFQAEYP
101: VFQKVRVNGQ NAAPLYKFLK ASKPTFLGSR IKWNFTKFLV SKDGIVIDRY GTMATPLSIE KDIKKALEEA

Best Arabidopsis Sequence Match ( AT2G48150.1 )
(BLAST)

001: MGASASVPER SVHQFTVKDS SGKDLNMSIY QGKVLLIVNV ASKCGFTETN YTQLTELYRK YKDQDFEILA FPCNQFLYQE PGTSQEAHEF ACERFKAEYP
101: VFQKVRVNGQ NAAPIYKFLK ASKPTFLGSR IKWNFTKFLV GKDGLVIDRY GTMVTPLSIE KDIKKALEDA

Arabidopsis Description

GPX4Probable glutathione peroxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L910]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.