CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34354	Canola	cytosol	96.99	96.41
AT1G63460.1	Thale cress	cytosol	90.96	90.42
Solyc12g056240.1.1	Tomato	cytosol	81.33	79.41
PGSC0003DMT400012775	Potato	cytosol	80.72	78.82
VIT_02s0025g03590.t01	Wine grape	cytosol	76.51	74.71
KRH41161	Soybean	cytosol	74.7	74.25
KRH27930	Soybean	cytosol	72.89	72.46
CDX86767	Canola	cytosol	63.86	61.99
CDY70265	Canola	cytosol	63.25	61.4
CDX84772	Canola	cytosol	58.43	57.4
CDY23931	Canola	cytosol	57.83	56.8
CDY54730	Canola	cytosol	57.83	56.8
CDY10812	Canola	cytosol	57.83	56.8
CDX83486	Canola	endoplasmic reticulum	66.27	55.84
CDY44221	Canola	endoplasmic reticulum	65.66	55.33
CDX80153	Canola	cytosol	54.82	53.53
CDX80155	Canola	cytosol	54.82	53.53
CDY66093	Canola	cytosol	54.22	52.94
CDX67915	Canola	cytosol	56.02	52.84
CDX79424	Canola	cytosol	56.02	52.84
CDY27457	Canola	cytosol	45.18	52.82
CDY72064	Canola	cytosol	54.22	51.72
CDY60808	Canola	cytosol	42.77	50.71
KRH77534	Soybean	cytosol, mitochondrion	24.1	50.63
CDX89171	Canola	cytosol	53.61	50.0
CDX93937	Canola	cytosol	53.61	48.9
CDY37628	Canola	mitochondrion, plastid	65.06	47.16
CDY25288	Canola	mitochondrion, plastid	65.06	47.16
CDY15038	Canola	cytosol	53.01	47.06
CDY13458	Canola	plastid	56.63	40.52
CDY01168	Canola	plastid	56.63	40.52
CDY69660	Canola	plastid	56.63	40.34
CDX72332	Canola	plastid	56.02	40.09
CDY07183	Canola	plastid	28.31	37.6
CDX76773	Canola	plastid	54.22	37.34

Protein Annotations

MapMan:10.4.2	Gene3D:3.40.30.10	GO:A0A078GJR8	UniProt:A0A078GJR8	EnsemblPlants:CDY25499	ProteinID:CDY25499
ProteinID:CDY25499.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0004602	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114
GO:GO:0098869	InterPro:GPX_AS	InterPro:GPX_CS	EnsemblPlantsGene:GSBRNA2T00032732001	InterPro:Glutathione_peroxidase	InterPro:IPR000889
PFAM:PF00255	PIRSF:PIRSF000303	PRINTS:PR01011	ScanProsite:PS00460	ScanProsite:PS00763	PFscan:PS51355
PANTHER:PTHR11592	PANTHER:PTHR11592:SF27	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0003E7575E	:

Description

BnaC09g11240DGlutathione peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A078GJR8]

Coordinates

chrLK032176:+:107804..109144

Molecular Weight (calculated)

18928.5 Da

IEP (calculated)

4.745

GRAVY (calculated)

-0.446

Length

166 amino acids

Sequence
(BLAST)

001: MATKEPVSVY DISIEDANGN SLELSQYKDK VLLIVNVASK CGMTNSNYTE LNELYNKYKD KGLEILAFPC NQFGEEEPGT TDQITEFVCT KFKSEFPIFN
101: KIEVNGENAS PLYKFLKKGK WGIFGDEIQW NFAKFLVDKN GQAVERYYPT TSPLTLEHDI KKLLNV

Best Arabidopsis Sequence Match ( AT1G63460.1 )
(BLAST)

001: MATKEPESVY ELSIEDAKGN NLALSQYKDK VLLIVNVASK CGMTNSNYTE LNELYNRYKD KGLEILAFPC NQFGDEEPGT NDQITDFVCT RFKSEFPIFN
101: KIEVNGENAS PLYKFLKKGK WGIFGDDIQW NFAKFLVDKN GQAVQRYYPT TSPLTLEHDI KNLLNIS

Arabidopsis Description

GPX8Probable glutathione peroxidase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBU2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.