CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007819.1-P	Field mustard	plastid	99.57	99.57
CDX76773	Canola	plastid	95.28	92.12
AT2G25080.1	Thale cress	plastid	87.55	86.44
KRH15634	Soybean	extracellular	38.2	78.07
CDX72332	Canola	plastid	69.96	70.26
CDY13458	Canola	plastid	69.96	70.26
CDY01168	Canola	plastid	69.96	70.26
VIT_04s0008g06780.t01	Wine grape	plastid	73.39	69.51
CDX86767	Canola	cytosol	50.64	69.01
CDY70265	Canola	cytosol	50.21	68.42
KRH05382	Soybean	plastid	68.24	67.95
Solyc08g006720.2.1	Tomato	plastid	68.24	66.81
CDY10812	Canola	cytosol	47.64	65.68
CDY54730	Canola	cytosol	47.64	65.68
PGSC0003DMT400067601	Potato	plastid	66.95	65.55
TraesCS7B01G054400.1	Wheat	plastid	62.66	64.32
Os06t0185900-01	Rice	plastid	64.38	64.1
TraesCS7A01G150500.1	Wheat	plastid	62.23	63.32
CDX84772	Canola	cytosol	45.92	63.31
CDY23931	Canola	cytosol	45.92	63.31
EER87981	Sorghum	plastid	62.23	62.5
TraesCS7D01G152400.1	Wheat	plastid	61.37	62.45
Zm00001d037079_P001	Maize	plastid	61.37	62.17
GSMUA_Achr7P16200_001	Banana	plastid	62.66	60.83
CDY60808	Canola	cytosol	35.62	59.29
CDY27457	Canola	cytosol	35.19	57.75
CDX80153	Canola	cytosol	42.06	57.65
CDX80155	Canola	cytosol	42.06	57.65
CDY66093	Canola	cytosol	41.63	57.06
CDY25499	Canola	cytosol	40.34	56.63
CDY72064	Canola	cytosol	41.63	55.75
CDY34354	Canola	cytosol	39.91	55.69
CDX67915	Canola	cytosol	42.06	55.68
CDX79424	Canola	cytosol	42.06	55.68
CDX83486	Canola	endoplasmic reticulum	46.78	55.33
CDY44221	Canola	endoplasmic reticulum	45.92	54.31
CDX89171	Canola	cytosol	41.2	53.93
GSMUA_Achr5P24260_001	Banana	plasma membrane	68.67	53.87
CDY25288	Canola	mitochondrion, plastid	52.79	53.71
CDY37628	Canola	mitochondrion, plastid	52.79	53.71
HORVU7Hr1G030810.1	Barley	plastid	59.66	52.85
CDX93937	Canola	cytosol	41.2	52.75
CDY15038	Canola	cytosol	40.34	50.27
CDY07183	Canola	plastid	15.02	28.0

Protein Annotations

MapMan:10.4.2	Gene3D:3.40.30.10	GO:A0A078JT91	UniProt:A0A078JT91	EnsemblPlants:CDY69660	ProteinID:CDY69660
ProteinID:CDY69660.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0004602	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114
GO:GO:0098869	InterPro:GPX_AS	InterPro:GPX_CS	EnsemblPlantsGene:GSBRNA2T00091439001	InterPro:Glutathione_peroxidase	InterPro:IPR000889
PFAM:PF00255	PIRSF:PIRSF000303	PRINTS:PR01011	ScanProsite:PS00460	ScanProsite:PS00763	PFscan:PS51355
PANTHER:PTHR11592	PANTHER:PTHR11592:SF42	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0004EDF7E7	SEG:seg

Description

BnaAnng31150DGlutathione peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A078JT91]

Coordinates

chrLK039980:+:2476..3862

Molecular Weight (calculated)

25836.8 Da

IEP (calculated)

9.734

GRAVY (calculated)

-0.208

Length

233 amino acids

Sequence
(BLAST)

001: MAFSSSYYSP FSALFDVSKP NPSLNPAAFL VPSLKFSTAI SNFANGFSLK SPINPGFLFK SRTFNVQARA AAEKTVHDFT VKDIDGNDVS LNKYKGKVML
101: IVNVASRCGL TSSNYSELSH LYEKYKSQGF EILAFPCNQF GGQEPGSNPE IKQFACTRFK AEFPIFDKVD VNGPSTAPIY QFLKSNAGGF LGDLIKWNFE
201: KFLIDKKGKV VERYPPTTSP FQIEKDIKKL LAA

Best Arabidopsis Sequence Match ( AT2G25080.1 )
(BLAST)

001: MVSMTTSSSS YGTFSTVVNS SRPNSSATFL VPSLKFSTGI SNFANLSNGF SLKSPINPGF LFKSRPFTVQ ARAAAEKTVH DFTVKDIDGK DVALNKFKGK
101: VMLIVNVASR CGLTSSNYSE LSHLYEKYKT QGFEILAFPC NQFGFQEPGS NSEIKQFACT RFKAEFPIFD KVDVNGPSTA PIYEFLKSNA GGFLGGLIKW
201: NFEKFLIDKK GKVVERYPPT TSPFQIEKDI QKLLAA

Arabidopsis Description

GPX1Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P52032]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.