Factsheet for Zm00001d037079_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 20089766
extracellular: 20408568
plastid: 22065420
plastid: 23198870

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER87981	Sorghum	plastid	96.52	95.69
TraesCS7B01G054400.1	Wheat	plastid	77.39	78.41
TraesCS7D01G152400.1	Wheat	plastid	77.83	78.17
TraesCS7A01G150500.1	Wheat	plastid	77.83	78.17
KRH15634	Soybean	extracellular	38.7	78.07
Os06t0185900-01	Rice	plastid	74.78	73.5
Zm00001d002704_P001	Maize	cytosol	51.74	70.83
PGSC0003DMT400067601	Potato	plastid	68.7	66.39
Zm00001d026154_P002	Maize	cytosol	50.43	65.91
Solyc08g006720.2.1	Tomato	plastid	67.83	65.55
AT4G31870.1	Thale cress	plastid	66.09	65.24
VIT_04s0008g06780.t01	Wine grape	plastid	69.57	65.04
HORVU7Hr1G030810.1	Barley	plastid	73.04	63.88
KRH05382	Soybean	plastid	64.78	63.68
Zm00001d029089_P001	Maize	cytosol	45.22	62.65
GSMUA_Achr7P16200_001	Banana	plastid	65.22	62.5
AT2G25080.1	Thale cress	plastid	63.48	61.86
CDY69660	Canola	plastid	62.17	61.37
Bra007819.1-P	Field mustard	plastid	61.74	60.94
Zm00001d047448_P002	Maize	extracellular, mitochondrion, plasma membrane	44.78	60.59
CDY13458	Canola	plastid	60.0	59.48
CDY01168	Canola	plastid	60.0	59.48
Bra023978.1-P	Field mustard	plastid	60.0	59.48
CDX72332	Canola	plastid	59.57	59.05
Zm00001d029085_P001	Maize	plastid	30.43	57.38
CDX76773	Canola	plastid	58.7	56.02
GSMUA_Achr5P24260_001	Banana	plasma membrane	72.17	55.89
Zm00001d051392_P001	Maize	mitochondrion	56.09	52.44

Protein Annotations

MapMan:10.4.2	EntrezGene:100272844	Gene3D:3.40.30.10	ProteinID:AQK82786.1	EMBL:BT062937	UniProt:C0P3R8
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0004602	GO:GO:0006950	GO:GO:0006979
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	GO:GO:0098869
InterPro:GPX_AS	InterPro:GPX_CS	InterPro:Glutathione_peroxidase	InterPro:IPR000889	PFAM:PF00255	PIRSF:PIRSF000303
PRINTS:PR01011	ScanProsite:PS00460	ScanProsite:PS00763	PFscan:PS51355	PANTHER:PTHR11592	PANTHER:PTHR11592:SF42
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0001948E7A	EnsemblPlantsGene:Zm00001d037079	EnsemblPlants:Zm00001d037079_P001	EnsemblPlants:Zm00001d037079_T001
SEG:seg	:	:	:	:	:

Description

Glutathione peroxidase

Coordinates

chr6:+:111618610..111623602

Molecular Weight (calculated)

24994.8 Da

IEP (calculated)

10.063

GRAVY (calculated)

-0.201

Length

230 amino acids

Sequence
(BLAST)

001: MAPSFTSLLS AANSAAAATA SRLPSAAAGR ASTFVRFPHH PTGWAGASVA APRTARKRAP GVAYATAATE KSIYDYTVKD IDGKDVPLKK FKNKVLLIVN
101: VASQCGLTTA NYTELSHIYE KYKTQGFEIL AFPCNQFGAQ EPGSNTQIKQ FACTRFKAEF PIFDKVDVNG PNTAPIYKFL KSSAGGFLGD LVKWNFEKFL
201: VDKNGKVIER YPPTTSPFQI EKDIQKLLAA

Best Arabidopsis Sequence Match ( AT2G25080.1 )
(BLAST)

001: MVSMTTSSSS YGTFSTVVNS SRPNSSATFL VPSLKFSTGI SNFANLSNGF SLKSPINPGF LFKSRPFTVQ ARAAAEKTVH DFTVKDIDGK DVALNKFKGK
101: VMLIVNVASR CGLTSSNYSE LSHLYEKYKT QGFEILAFPC NQFGFQEPGS NSEIKQFACT RFKAEFPIFD KVDVNGPSTA PIYEFLKSNA GGFLGGLIKW
201: NFEKFLIDKK GKVVERYPPT TSPFQIEKDI QKLLAA

Arabidopsis Description

GPX1Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P52032]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.