Factsheet for Bra007819.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69660	Canola	plastid	99.57	99.57
CDX76773	Canola	plastid	95.71	92.53
AT2G25080.1	Thale cress	plastid	87.55	86.44
KRH15634	Soybean	extracellular	38.2	78.07
Bra023978.1-P	Field mustard	plastid	69.53	69.83
VIT_04s0008g06780.t01	Wine grape	plastid	72.96	69.11
Bra035211.1-P	Field mustard	cytosol	50.64	69.01
KRH05382	Soybean	plastid	68.67	68.38
Solyc08g006720.2.1	Tomato	plastid	68.67	67.23
PGSC0003DMT400067601	Potato	plastid	67.38	65.97
Bra018232.1-P	Field mustard	cytosol	47.64	65.68
TraesCS7B01G054400.1	Wheat	plastid	62.66	64.32
Os06t0185900-01	Rice	plastid	64.38	64.1
TraesCS7A01G150500.1	Wheat	plastid	62.23	63.32
Bra022853.1-P	Field mustard	cytosol	45.92	63.31
TraesCS7D01G152400.1	Wheat	plastid	61.37	62.45
EER87981	Sorghum	plastid	61.8	62.07
Zm00001d037079_P001	Maize	plastid	60.94	61.74
GSMUA_Achr7P16200_001	Banana	plastid	62.66	60.83
Bra004409.1-P	Field mustard	cytosol	42.06	57.65
Bra000302.1-P	Field mustard	endoplasmic reticulum	46.35	54.82
GSMUA_Achr5P24260_001	Banana	plasma membrane	68.67	53.87
Bra033140.1-P	Field mustard	mitochondrion, plastid	52.79	53.71
HORVU7Hr1G030810.1	Barley	plastid	59.66	52.85
Bra021456.1-P	Field mustard	cytosol	39.06	44.39
Bra003522.1-P	Field mustard	cytosol	40.34	39.66
Bra037370.1-P	Field mustard	extracellular, plastid	13.3	34.44

Protein Annotations

MapMan:10.4.2	Gene3D:3.40.30.10	EnsemblPlantsGene:Bra007819	EnsemblPlants:Bra007819.1	EnsemblPlants:Bra007819.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0004602	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009535	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009941	GO:GO:0009987
GO:GO:0016020	GO:GO:0016491	GO:GO:0055114	GO:GO:0098869	InterPro:GPX_AS	InterPro:GPX_CS
InterPro:Glutathione_peroxidase	InterPro:IPR000889	UniProt:M4CUC5	PFAM:PF00255	PIRSF:PIRSF000303	PRINTS:PR01011
ScanProsite:PS00460	ScanProsite:PS00763	PFscan:PS51355	PANTHER:PTHR11592	PANTHER:PTHR11592:SF42	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0002542D05	SEG:seg	:	:	:

Description

AT2G25080 (E=9e-111) ATGPX1 | ATGPX1 (GLUTATHIONE PEROXIDASE 1); glutathione peroxidase

Coordinates

chrA09:-:31053884..31055176

Molecular Weight (calculated)

25776.7 Da

IEP (calculated)

9.734

GRAVY (calculated)

-0.224

Length

233 amino acids

Sequence
(BLAST)

001: MASSSSYYSP FSALFDVSKP NPSLNPAAFL VPSLKFSTAI SNFANGFSLK SPINPGFLFK SRTFNVQARA AAEKTVHDFT VKDIDGNDVS LNKYKGKVML
101: IVNVASRCGL TSSNYSELSH LYEKYKSQGF EILAFPCNQF GGQEPGSNPE IKQFACTRFK AEFPIFDKVD VNGPSTAPIY QFLKSNAGGF LGDLIKWNFE
201: KFLIDKKGKV VERYPPTTSP FQIEKDIKKL LAA

Best Arabidopsis Sequence Match ( AT2G25080.1 )
(BLAST)

001: MVSMTTSSSS YGTFSTVVNS SRPNSSATFL VPSLKFSTGI SNFANLSNGF SLKSPINPGF LFKSRPFTVQ ARAAAEKTVH DFTVKDIDGK DVALNKFKGK
101: VMLIVNVASR CGLTSSNYSE LSHLYEKYKT QGFEILAFPC NQFGFQEPGS NSEIKQFACT RFKAEFPIFD KVDVNGPSTA PIYEFLKSNA GGFLGGLIKW
201: NFEKFLIDKK GKVVERYPPT TSPFQIEKDI QKLLAA

Arabidopsis Description

GPX1Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P52032]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.