Factsheet for GSMUA_Achr7P16200_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15634	Soybean	extracellular	34.58	72.81
GSMUA_Achr11P...	Banana	unclear	47.08	67.26
GSMUA_Achr4P26240_001	Banana	cytosol	46.25	66.07
Zm00001d037079_P001	Maize	plastid	62.5	65.22
GSMUA_AchrUn_...	Banana	cytosol	45.42	64.88
AT4G31870.1	Thale cress	plastid	62.92	64.81
TraesCS7B01G054400.1	Wheat	plastid	61.25	64.76
EER87981	Sorghum	plastid	61.67	63.79
TraesCS7A01G150500.1	Wheat	plastid	60.83	63.76
Os06t0185900-01	Rice	plastid	62.08	63.68
TraesCS7D01G152400.1	Wheat	plastid	60.42	63.32
AT2G25080.1	Thale cress	plastid	62.08	63.14
Solyc08g006720.2.1	Tomato	plastid	62.5	63.03
PGSC0003DMT400067601	Potato	plastid	62.5	63.03
CDY69660	Canola	plastid	60.83	62.66
Bra007819.1-P	Field mustard	plastid	60.83	62.66
GSMUA_Achr9P07960_001	Banana	cytosol	30.42	62.39
CDY13458	Canola	plastid	60.0	62.07
Bra023978.1-P	Field mustard	plastid	60.0	62.07
CDY01168	Canola	plastid	60.0	62.07
KRH05382	Soybean	plastid	60.42	61.97
CDX72332	Canola	plastid	59.58	61.64
VIT_04s0008g06780.t01	Wine grape	plastid	62.5	60.98
CDX76773	Canola	plastid	58.33	58.09
GSMUA_Achr5P07930_001	Banana	cytosol	40.42	57.06
GSMUA_Achr5P24260_001	Banana	plasma membrane	65.42	52.86
HORVU7Hr1G030810.1	Barley	plastid	57.5	52.47
GSMUA_Achr8P11390_001	Banana	cytosol	32.5	44.83

Protein Annotations

MapMan:10.4.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0004602
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0055114	GO:GO:0098869	InterPro:GPX_AS	InterPro:GPX_CS	EnsemblPlantsGene:GSMUA_Achr7G16200_001	EnsemblPlants:GSMUA_Achr7P16200_001
EnsemblPlants:GSMUA_Achr7T16200_001	InterPro:Glutathione_peroxidase	InterPro:IPR000889	UniProt:M0TI07	PFAM:PF00255	PIRSF:PIRSF000303
PRINTS:PR01011	ScanProsite:PS00460	ScanProsite:PS00763	PFscan:PS51355	PANTHER:PTHR11592	PANTHER:PTHR11592:SF42
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002967CE3	SEG:seg	:	:

Description

Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr7G16200_001]

Coordinates

chr7:+:13296463..13300956

Molecular Weight (calculated)

26455.7 Da

IEP (calculated)

9.913

GRAVY (calculated)

-0.224

Length

240 amino acids

Sequence
(BLAST)

001: MASAAAASSA LFYANPTLHA GFQDMRAKTP TAEFLHLSAK FSDGLPTSAF RVLKHPSRLR QNLGSVGRPG RTPGVAYATA ATEKRVHDFT VKDIDGKDVS
101: LNKFKGKILL IVNVASRCGL TSSNYSELSH IYEKYKTQGF EVLAFPCNQF GGQEPGSNSE IKQFACTRFK ADFPIFDKAC HIAPIFYQFL KSSAGGFLGD
201: LIKWNFEKFL VDKNGKVVER YPPTTSPFQI EKDIQKLLAA

Best Arabidopsis Sequence Match ( AT2G25080.1 )
(BLAST)

001: MVSMTTSSSS YGTFSTVVNS SRPNSSATFL VPSLKFSTGI SNFANLSNGF SLKSPINPGF LFKSRPFTVQ ARAAAEKTVH DFTVKDIDGK DVALNKFKGK
101: VMLIVNVASR CGLTSSNYSE LSHLYEKYKT QGFEILAFPC NQFGFQEPGS NSEIKQFACT RFKAEFPIFD KVDVNGPSTA PIYEFLKSNA GGFLGGLIKW
201: NFEKFLIDKK GKVVERYPPT TSPFQIEKDI QKLLAA

Arabidopsis Description

GPX1Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P52032]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.