Factsheet for GSMUA_Achr4P26240_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	unclear	88.1	88.1
GSMUA_AchrUn_...	Banana	cytosol	87.5	87.5
EES11677	Sorghum	cytosol	73.21	71.93
TraesCS2A01G582100.1	Wheat	cytosol	73.21	71.93
TraesCS2B01G604800.1	Wheat	cytosol	72.62	71.34
TraesCS2D01G598000.1	Wheat	cytosol	72.62	71.34
HORVU2Hr1G123750.1	Barley	cytosol	72.02	70.76
GSMUA_Achr9P07960_001	Banana	cytosol	47.62	68.38
GSMUA_Achr5P07930_001	Banana	cytosol	66.07	65.29
GSMUA_Achr8P11390_001	Banana	cytosol	60.12	58.05
GSMUA_Achr7P16200_001	Banana	plastid	66.07	46.25
GSMUA_Achr5P24260_001	Banana	plasma membrane	70.24	39.73

Protein Annotations

MapMan:10.4.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0004602
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0055114	GO:GO:0098869	InterPro:GPX_AS	InterPro:GPX_CS	EnsemblPlantsGene:GSMUA_Achr4G26240_001	EnsemblPlants:GSMUA_Achr4P26240_001
EnsemblPlants:GSMUA_Achr4T26240_001	InterPro:Glutathione_peroxidase	InterPro:IPR000889	UniProt:M0SS86	PFAM:PF00255	PIRSF:PIRSF000303
PRINTS:PR01011	ScanProsite:PS00460	ScanProsite:PS00763	PFscan:PS51355	PANTHER:PTHR11592	PANTHER:PTHR11592:SF42
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000295C1A7	:	:	:

Description

Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr4G26240_001]

Coordinates

chr4:+:25602440..25605740

Molecular Weight (calculated)

18738.3 Da

IEP (calculated)

8.014

GRAVY (calculated)

-0.370

Length

168 amino acids

Sequence
(BLAST)

001: MSSSKPAGSI HDFTVKDARG NDVDLSIYKG KVLLIVNVAS QCGLTNSNYK ELTQLYEKYK DKDFEILAFP CNQFAGQEPG SNEEIVEFAC TRFKAEYPIF
101: DKVDVNGQNA TPIYKFLKSS KGGIFGDGIK WNFTKFLVDK DGRVVDRYAP TTSPLSIEKD IKKLLGLS

Best Arabidopsis Sequence Match ( AT4G11600.1 )
(BLAST)

001: MLRSSIRLLY IRRTSPLLRS LSSSSSSSSS KRFDSAKPLF NSHRIISLPI STTGAKLSRS EHSMAASSEP KSLYDFTVKD AKGNDVDLSI YKGKVLLIVN
101: VASQCGLTNS NYTELAQLYE KYKGHGFEIL AFPCNQFGNQ EPGTNEEIVQ FACTRFKAEY PIFDKVDVNG DKAAPVYKFL KSSKGGLFGD GIKWNFAKFL
201: VDKDGNVVDR FAPTTSPLSI EKDVKKLLGV TA

Arabidopsis Description

GPX6Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O48646]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.