Factsheet for GSMUA_Achr8P11390_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	unclear	59.2	61.31
GSMUA_Achr4P26240_001	Banana	cytosol	58.05	60.12
GSMUA_AchrUn_...	Banana	cytosol	57.47	59.52
TraesCS2D01G598000.1	Wheat	cytosol	52.87	53.8
TraesCS2A01G582100.1	Wheat	cytosol	52.3	53.22
TraesCS2B01G604800.1	Wheat	cytosol	51.72	52.63
HORVU2Hr1G123750.1	Barley	cytosol	51.15	52.05
EES11677	Sorghum	cytosol	48.85	49.71
GSMUA_Achr5P07930_001	Banana	cytosol	43.68	44.71
GSMUA_Achr9P07960_001	Banana	cytosol	29.31	43.59
GSMUA_Achr7P16200_001	Banana	plastid	44.83	32.5
GSMUA_Achr5P24260_001	Banana	plasma membrane	47.7	27.95

Protein Annotations

MapMan:10.4.2	Gene3D:3.40.30.10	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0004602	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSMUA_Achr8G11390_001	EnsemblPlants:GSMUA_Achr8P11390_001	EnsemblPlants:GSMUA_Achr8T11390_001
InterPro:Glutathione_peroxidase	InterPro:IPR000889	UniProt:M0TPJ2	PFAM:PF00255	PIRSF:PIRSF000303	PRINTS:PR01011
PFscan:PS51355	PANTHER:PTHR11592	PANTHER:PTHR11592:SF42	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000296B11A

Description

Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr8G11390_001]

Coordinates

chr8:+:8212635..8214964

Molecular Weight (calculated)

19670.3 Da

IEP (calculated)

6.272

GRAVY (calculated)

-0.390

Length

174 amino acids

Sequence
(BLAST)

001: MASTECAASI REFTIKDAKG NDVDLSTYKG KVLQIVNVAS RCELANSNYM ELSQLYEKYK RNASKELDKL AQEITPSFND RAANWLISKF WPSHAFSLEG
101: QEPGSNGEIV EFACTHFKAE YPIFEVDVNG DNATPIYKFL RSNKGGILED SIKWNFAKFL IDKDGHVVMS RIKL

Best Arabidopsis Sequence Match ( AT2G25080.1 )
(BLAST)

001: MVSMTTSSSS YGTFSTVVNS SRPNSSATFL VPSLKFSTGI SNFANLSNGF SLKSPINPGF LFKSRPFTVQ ARAAAEKTVH DFTVKDIDGK DVALNKFKGK
101: VMLIVNVASR CGLTSSNYSE LSHLYEKYKT QGFEILAFPC NQFGFQEPGS NSEIKQFACT RFKAEFPIFD KVDVNGPSTA PIYEFLKSNA GGFLGGLIKW
201: NFEKFLIDKK GKVVERYPPT TSPFQIEKDI QKLLAA

Arabidopsis Description

GPX1Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P52032]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.