Factsheet for GSMUA_Achr5P07930_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G63080.1	GSMUA_Achr10P...	AT1G07000.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047448_P002	Maize	extracellular, mitochondrion, plasma membrane	74.12	74.12
Os03t0358100-01	Rice	plasma membrane	72.35	72.78
CDY27457	Canola	cytosol	60.59	72.54
Bra004409.1-P	Field mustard	cytosol	71.76	71.76
CDX80153	Canola	cytosol	71.76	71.76
CDX80155	Canola	cytosol	71.76	71.76
CDY66093	Canola	cytosol	71.18	71.18
AT2G48150.1	Thale cress	cytosol	70.59	70.59
KRH67169	Soybean	cytosol	70.59	70.59
CDY72064	Canola	cytosol	71.76	70.11
VIT_07s0104g00320.t01	Wine grape	cytosol	70.0	70.0
Solyc09g064850.2.1	Tomato	nucleus	70.0	70.0
KRG95489	Soybean	cytosol	70.0	68.79
AT3G63080.1	Thale cress	cytosol	69.41	68.21
GSMUA_Achr11P...	Banana	unclear	65.29	66.07
GSMUA_Achr4P26240_001	Banana	cytosol	65.29	66.07
TraesCS4D01G162000.1	Wheat	plastid	72.35	65.78
TraesCS4B01G152800.1	Wheat	cytosol	72.35	65.78
TraesCS4A01G142000.1	Wheat	cytosol	66.47	65.7
CDX79424	Canola	cytosol	67.65	65.34
KRH71458	Soybean	endoplasmic reticulum	65.29	65.29
GSMUA_AchrUn_...	Banana	cytosol	64.12	64.88
CDX67915	Canola	cytosol	67.06	64.77
CDX89171	Canola	cytosol	67.06	64.04
KRH31991	Soybean	cytosol	63.53	63.53
CDX93937	Canola	cytosol	67.65	63.19
CDY15038	Canola	cytosol	69.41	63.1
KXG39330	Sorghum	cytosol	71.18	61.11
HORVU4Hr1G035380.1	Barley	cytosol	72.35	60.59
GSMUA_Achr9P07960_001	Banana	cytosol	41.18	59.83
Bra021456.1-P	Field mustard	cytosol	68.24	56.59
Bra003522.1-P	Field mustard	cytosol	65.29	46.84
GSMUA_Achr8P11390_001	Banana	cytosol	44.71	43.68
GSMUA_Achr7P16200_001	Banana	plastid	57.06	40.42
GSMUA_Achr5P24260_001	Banana	plasma membrane	62.35	35.69

Protein Annotations

MapMan:10.4.2	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0004602
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0055114	GO:GO:0098869	InterPro:GPX_AS	InterPro:GPX_CS	EnsemblPlantsGene:GSMUA_Achr5G07930_001	EnsemblPlants:GSMUA_Achr5P07930_001
EnsemblPlants:GSMUA_Achr5T07930_001	InterPro:Glutathione_peroxidase	InterPro:IPR000889	UniProt:M0SWM2	PFAM:PF00255	PIRSF:PIRSF000303
PRINTS:PR01011	ScanProsite:PS00460	ScanProsite:PS00763	PFscan:PS51355	PANTHER:PTHR11592	PANTHER:PTHR11592:SF17
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002960FC9	:	:	:

Description

Probable glutathione peroxidase 4 [Source:GMGC_GENE;Acc:GSMUA_Achr5G07930_001]

Coordinates

chr5:+:5673710..5679941

Molecular Weight (calculated)

19186.0 Da

IEP (calculated)

9.805

GRAVY (calculated)

-0.451

Length

170 amino acids

Sequence
(BLAST)

001: MGAYQSAPTE TSVHQFTVKD GSGRDVDLGI YKGKVLLVVN VASKCGFTNS NYTQLTELYN KYKSKDFEIL AFPCNQFLHQ EPRTEQEIKD FACTRFKAEF
101: PIFQKVKVNG PETVAVYKFL KASKPGFMGN RIKWNFTKFL IDKEGKVIGR YGTTKSPSSI EQDIQKALGS

Best Arabidopsis Sequence Match ( AT2G48150.1 )
(BLAST)

001: MGASASVPER SVHQFTVKDS SGKDLNMSIY QGKVLLIVNV ASKCGFTETN YTQLTELYRK YKDQDFEILA FPCNQFLYQE PGTSQEAHEF ACERFKAEYP
101: VFQKVRVNGQ NAAPIYKFLK ASKPTFLGSR IKWNFTKFLV GKDGLVIDRY GTMVTPLSIE KDIKKALEDA

Arabidopsis Description

GPX4Probable glutathione peroxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L910]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.